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Researcher profile

Willie Neiswanger

Willie Neiswanger contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate
Machine LearningArtificial IntelligenceNeural and Evolutionary ComputingComputation and Languagecond-mat.mtrl-sciInformation Theorymath.ITMethodologyphysics.comp-phRobotics

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Published work

13 published item(s)

preprint2026arXiv

Neural Nonmyopic Bayesian Optimization in Dynamic Cost Settings

Bayesian optimization (BO) is a common framework for optimizing black-box functions, yet most existing methods assume static query costs and rely on myopic acquisition strategies. We introduce LookaHES, a nonmyopic BO framework designed for dynamic, history-dependent cost environments, where evaluation costs vary with prior actions, such as travel distance in spatial tasks or edit distance in sequence design. LookaHES combines a multi-step variant of $H$-Entropy Search with pathwise sampling and neural policy optimization, enabling long-horizon planning beyond twenty steps without the exponential complexity of existing nonmyopic methods. The key innovation is the integration of neural policies, including large language models, to effectively navigate structured, combinatorial action spaces such as protein sequences. These policies amortize lookahead planning and can be integrated with domain-specific constraints during rollout. Empirically, LookaHES outperforms strong myopic and nonmyopic baselines across nine synthetic benchmarks from two to eight dimensions and two real-world tasks: geospatial optimization using NASA night-light imagery and protein sequence design with constrained token-level edits. In short, LookaHES provides a general, scalable, and cost-aware solution for robust long-horizon optimization in complex decision spaces, which makes it a useful tool for researchers in machine learning, statistics, and applied domains. Our implementation is available at https://github.com/sangttruong/nonmyopia.

0 citations0 reviewsNo code linkedOpen access
preprint2026arXiv

Rethinking RL for LLM Reasoning: It's Sparse Policy Selection, Not Capability Learning

Reinforcement learning has become the standard for improving reasoning in large language models, yet evidence increasingly suggests that RL does not teach new strategies; it redistributes probability mass over solutions the base model already contains. In this work, we ask: if RL merely steers the model toward paths it already knows, is the RL optimization loop itself necessary? Through token-level analysis across multiple model families and RL algorithms, we find that RL's beneficial footprint is a sparse, predictable correction concentrated at high-entropy decision points where the model is uncertain which branch to take. Only 1--3\% of token positions are affected, the promoted token always lies within the base model's top-5 alternatives, and targeted corrections at those few positions causally recover a large fraction of RL's accuracy gain, while random corrections fail. The base model's own entropy identifies these positions without any RL-trained model, and the entire correction is low-dimensional, representable in a tiny fraction of model parameters. These findings reframe reasoning improvement as sparse policy selection, not capability acquisition. We translate this insight into ReasonMaxxer, a minimal RL-free method that applies contrastive loss only at entropy-gated decision points, using a few hundred base-model rollouts and no online generation. Across three model families, six scales, and six math reasoning benchmarks, ReasonMaxxer matches or exceeds full RL performance while requiring only tens of problems and minutes of single-GPU training, a reduction in training cost of roughly three orders of magnitude.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Amortized Auto-Tuning: Cost-Efficient Bayesian Transfer Optimization for Hyperparameter Recommendation

With the surge in the number of hyperparameters and training times of modern machine learning models, hyperparameter tuning is becoming increasingly expensive. However, after assessing 40 tuning methods systematically, we find that each faces certain limitations. In particular, methods that speed up tuning via knowledge transfer typically require the final performance of hyperparameters and do not focus on low-fidelity information. As we demonstrate empirically, this common practice is suboptimal and can incur an unnecessary use of resources. It is more cost-efficient to instead leverage low-fidelity tuning observations to measure inter-task similarity and transfer knowledge from existing to new tasks accordingly. However, performing multi-fidelity tuning comes with its own challenges in the transfer setting: the noise in additional observations and the need for performance forecasting. Therefore, we propose and conduct a thorough analysis of a multi-task multi-fidelity Bayesian optimization framework, which leads to the best instantiation--amortized auto-tuning (AT2). We further present an offline-computed 27-task hyperparameter recommendation (HyperRec) database to serve the community. Extensive experiments on HyperRec and other real-world databases illustrate the effectiveness of our AT2 method.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

An Experimental Design Perspective on Model-Based Reinforcement Learning

In many practical applications of RL, it is expensive to observe state transitions from the environment. For example, in the problem of plasma control for nuclear fusion, computing the next state for a given state-action pair requires querying an expensive transition function which can lead to many hours of computer simulation or dollars of scientific research. Such expensive data collection prohibits application of standard RL algorithms which usually require a large number of observations to learn. In this work, we address the problem of efficiently learning a policy while making a minimal number of state-action queries to the transition function. In particular, we leverage ideas from Bayesian optimal experimental design to guide the selection of state-action queries for efficient learning. We propose an acquisition function that quantifies how much information a state-action pair would provide about the optimal solution to a Markov decision process. At each iteration, our algorithm maximizes this acquisition function, to choose the most informative state-action pair to be queried, thus yielding a data-efficient RL approach. We experiment with a variety of simulated continuous control problems and show that our approach learns an optimal policy with up to $5$ -- $1,000\times$ less data than model-based RL baselines and $10^3$ -- $10^5\times$ less data than model-free RL baselines. We also provide several ablated comparisons which point to substantial improvements arising from the principled method of obtaining data.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Modular Conformal Calibration

Uncertainty estimates must be calibrated (i.e., accurate) and sharp (i.e., informative) in order to be useful. This has motivated a variety of methods for recalibration, which use held-out data to turn an uncalibrated model into a calibrated model. However, the applicability of existing methods is limited due to their assumption that the original model is also a probabilistic model. We introduce a versatile class of algorithms for recalibration in regression that we call Modular Conformal Calibration (MCC). This framework allows one to transform any regression model into a calibrated probabilistic model. The modular design of MCC allows us to make simple adjustments to existing algorithms that enable well-behaved distribution predictions. We also provide finite-sample calibration guarantees for MCC algorithms. Our framework recovers isotonic recalibration, conformal calibration, and conformal interval prediction, implying that our theoretical results apply to those methods as well. Finally, we conduct an empirical study of MCC on 17 regression datasets. Our results show that new algorithms designed in our framework achieve near-perfect calibration and improve sharpness relative to existing methods.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

A Study on Encodings for Neural Architecture Search

Neural architecture search (NAS) has been extensively studied in the past few years. A popular approach is to represent each neural architecture in the search space as a directed acyclic graph (DAG), and then search over all DAGs by encoding the adjacency matrix and list of operations as a set of hyperparameters. Recent work has demonstrated that even small changes to the way each architecture is encoded can have a significant effect on the performance of NAS algorithms. In this work, we present the first formal study on the effect of architecture encodings for NAS, including a theoretical grounding and an empirical study. First we formally define architecture encodings and give a theoretical characterization on the scalability of the encodings we study Then we identify the main encoding-dependent subroutines which NAS algorithms employ, running experiments to show which encodings work best with each subroutine for many popular algorithms. The experiments act as an ablation study for prior work, disentangling the algorithmic and encoding-based contributions, as well as a guideline for future work. Our results demonstrate that NAS encodings are an important design decision which can have a significant impact on overall performance. Our code is available at https://github.com/naszilla/nas-encodings.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Interactive Weak Supervision: Learning Useful Heuristics for Data Labeling

Obtaining large annotated datasets is critical for training successful machine learning models and it is often a bottleneck in practice. Weak supervision offers a promising alternative for producing labeled datasets without ground truth annotations by generating probabilistic labels using multiple noisy heuristics. This process can scale to large datasets and has demonstrated state of the art performance in diverse domains such as healthcare and e-commerce. One practical issue with learning from user-generated heuristics is that their creation requires creativity, foresight, and domain expertise from those who hand-craft them, a process which can be tedious and subjective. We develop the first framework for interactive weak supervision in which a method proposes heuristics and learns from user feedback given on each proposed heuristic. Our experiments demonstrate that only a small number of feedback iterations are needed to train models that achieve highly competitive test set performance without access to ground truth training labels. We conduct user studies, which show that users are able to effectively provide feedback on heuristics and that test set results track the performance of simulated oracles.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Neural Dynamical Systems: Balancing Structure and Flexibility in Physical Prediction

We introduce Neural Dynamical Systems (NDS), a method of learning dynamical models in various gray-box settings which incorporates prior knowledge in the form of systems of ordinary differential equations. NDS uses neural networks to estimate free parameters of the system, predicts residual terms, and numerically integrates over time to predict future states. A key insight is that many real dynamical systems of interest are hard to model because the dynamics may vary across rollouts. We mitigate this problem by taking a trajectory of prior states as the input to NDS and train it to dynamically estimate system parameters using the preceding trajectory. We find that NDS learns dynamics with higher accuracy and fewer samples than a variety of deep learning methods that do not incorporate the prior knowledge and methods from the system identification literature which do. We demonstrate these advantages first on synthetic dynamical systems and then on real data captured from deuterium shots from a nuclear fusion reactor. Finally, we demonstrate that these benefits can be utilized for control in small-scale experiments.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Uncertainty quantification using martingales for misspecified Gaussian processes

We address uncertainty quantification for Gaussian processes (GPs) under misspecified priors, with an eye towards Bayesian Optimization (BO). GPs are widely used in BO because they easily enable exploration based on posterior uncertainty bands. However, this convenience comes at the cost of robustness: a typical function encountered in practice is unlikely to have been drawn from the data scientist's prior, in which case uncertainty estimates can be misleading, and the resulting exploration can be suboptimal. We present a frequentist approach to GP/BO uncertainty quantification. We utilize the GP framework as a working model, but do not assume correctness of the prior. We instead construct a confidence sequence (CS) for the unknown function using martingale techniques. There is a necessary cost to achieving robustness: if the prior was correct, posterior GP bands are narrower than our CS. Nevertheless, when the prior is wrong, our CS is statistically valid and empirically outperforms standard GP methods, in terms of both coverage and utility for BO. Additionally, we demonstrate that powered likelihoods provide robustness against model misspecification.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

BANANAS: Bayesian Optimization with Neural Architectures for Neural Architecture Search

Over the past half-decade, many methods have been considered for neural architecture search (NAS). Bayesian optimization (BO), which has long had success in hyperparameter optimization, has recently emerged as a very promising strategy for NAS when it is coupled with a neural predictor. Recent work has proposed different instantiations of this framework, for example, using Bayesian neural networks or graph convolutional networks as the predictive model within BO. However, the analyses in these papers often focus on the full-fledged NAS algorithm, so it is difficult to tell which individual components of the framework lead to the best performance. In this work, we give a thorough analysis of the "BO + neural predictor" framework by identifying five main components: the architecture encoding, neural predictor, uncertainty calibration method, acquisition function, and acquisition optimization strategy. We test several different methods for each component and also develop a novel path-based encoding scheme for neural architectures, which we show theoretically and empirically scales better than other encodings. Using all of our analyses, we develop a final algorithm called BANANAS, which achieves state-of-the-art performance on NAS search spaces. We adhere to the NAS research checklist (Lindauer and Hutter 2019) to facilitate best practices, and our code is available at https://github.com/naszilla/naszilla.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Methods for comparing uncertainty quantifications for material property predictions

Data science and informatics tools have been proliferating recently within the computational materials science and catalysis fields. This proliferation has spurned the creation of various frameworks for automated materials screening, discovery, and design. Underpinning these frameworks are surrogate models with uncertainty estimates on their predictions. These uncertainty estimates are instrumental for determining which materials to screen next, but the computational catalysis field does not yet have a standard procedure for judging the quality of such uncertainty estimates. Here we present a suite of figures and performance metrics derived from the machine learning community that can be used to judge the quality of such uncertainty estimates. This suite probes the accuracy, calibration, and sharpness of a model quantitatively. We then show a case study where we judge various methods for predicting density-functional-theory-calculated adsorption energies. Of the methods studied here, we find that the best performer is a model where a convolutional neural network is used to supply features to a Gaussian process regressor, which then makes predictions of adsorption energies along with corresponding uncertainty estimates.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Offline Contextual Bayesian Optimization for Nuclear Fusion

Nuclear fusion is regarded as the energy of the future since it presents the possibility of unlimited clean energy. One obstacle in utilizing fusion as a feasible energy source is the stability of the reaction. Ideally, one would have a controller for the reactor that makes actions in response to the current state of the plasma in order to prolong the reaction as long as possible. In this work, we make preliminary steps to learning such a controller. Since learning on a real world reactor is infeasible, we tackle this problem by attempting to learn optimal controls offline via a simulator, where the state of the plasma can be explicitly set. In particular, we introduce a theoretically grounded Bayesian optimization algorithm that recommends a state and action pair to evaluate at every iteration and show that this results in more efficient use of the simulator.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Tuning Hyperparameters without Grad Students: Scalable and Robust Bayesian Optimisation with Dragonfly

Bayesian Optimisation (BO) refers to a suite of techniques for global optimisation of expensive black box functions, which use introspective Bayesian models of the function to efficiently search for the optimum. While BO has been applied successfully in many applications, modern optimisation tasks usher in new challenges where conventional methods fail spectacularly. In this work, we present Dragonfly, an open source Python library for scalable and robust BO. Dragonfly incorporates multiple recently developed methods that allow BO to be applied in challenging real world settings; these include better methods for handling higher dimensional domains, methods for handling multi-fidelity evaluations when cheap approximations of an expensive function are available, methods for optimising over structured combinatorial spaces, such as the space of neural network architectures, and methods for handling parallel evaluations. Additionally, we develop new methodological improvements in BO for selecting the Bayesian model, selecting the acquisition function, and optimising over complex domains with different variable types and additional constraints. We compare Dragonfly to a suite of other packages and algorithms for global optimisation and demonstrate that when the above methods are integrated, they enable significant improvements in the performance of BO. The Dragonfly library is available at dragonfly.github.io.

0 citations0 reviewsNo code linkedOpen access