Source author record

Eric Xing

Eric Xing appears in the imported research catalog. Authorship, coauthor and topic links are available while profile ownership is still unclaimed.

ResearcherUnclaimed source record

Catalog footprint

What is connected

41works
16topics
4close collaborators

Actions

Connect this record

Log in to claim

Research graph

See the researcher in context

Open full explorer

Inspect adjacent papers, topics, institutions and collaborators without losing the researcher page.

Building this map preview

BZPEER is loading the nearby papers, people, topics and institutions for this page.

Published work

41 published item(s)

preprint2026arXiv

EMO: Frustratingly Easy Progressive Training of Extendable MoE

Sparse Mixture-of-Experts (MoE) models offer a powerful way to scale model size without increasing compute, as per-token FLOPs depend only on k active experts rather than the total pool of E experts. Yet, this asymmetry creates an MoE efficiency paradox in practice: adding more experts balloons memory and communication costs, making actual training inefficient. We argue that this bottleneck arises in part because current MoE training allocates too many experts from the beginning, even though early-stage data may not fully utilize such capacity. Motivated by this, we propose EMO, a simple progressive training framework that treats MoE capacity as expandable memory and grows the expert pool over the course of training. EMO explicitly models sparsity in scaling law to derive stage-wise compute-optimal token budgets for progressive expansion. Empirical results show that EMO matches the performance of a fixed-expert setup in large-scale experiments while improving wall-clock efficiency. It offers a surprisingly simple yet effective path to scalable MoE training, preserving the benefits of large expert pools while reducing both training time and GPU cost.

preprint2026arXiv

GQA-μP: The maximal parameterization update for grouped query attention

Hyperparameter transfer across model architectures dramatically reduces the amount of compute necessary for tuning large language models (LLMs). The maximal update parameterization (μP) ensures transfer through principled mathematical analysis but can be challenging to derive for new model architectures. Building on the spectral feature-learning view of Yang et al. (2023a), we make two advances. First, we promote spectral norm conditions on the weights from a heuristic to the definition of feature learning, and as a consequence arrive at the Complete-P depth and weight-decay scalings without recourse to lazy-learning. Second, we consider a modified spectral norm that preserves the valid scaling law of network weights when weight matrices are not full rank. This enables (to our knowledge, the first) derivation of μP scalings for grouped-query attention (GQA). We demonstrate the efficacy of our theoretical derivations by showing learning rate transfer across the GQA repetition hyperparameter as well as experiments regarding transfer over weight decay.

preprint2022arXiv

Data-Free Neural Architecture Search via Recursive Label Calibration

This paper aims to explore the feasibility of neural architecture search (NAS) given only a pre-trained model without using any original training data. This is an important circumstance for privacy protection, bias avoidance, etc., in real-world scenarios. To achieve this, we start by synthesizing usable data through recovering the knowledge from a pre-trained deep neural network. Then we use the synthesized data and their predicted soft-labels to guide neural architecture search. We identify that the NAS task requires the synthesized data (we target at image domain here) with enough semantics, diversity, and a minimal domain gap from the natural images. For semantics, we propose recursive label calibration to produce more informative outputs. For diversity, we propose a regional update strategy to generate more diverse and semantically-enriched synthetic data. For minimal domain gap, we use input and feature-level regularization to mimic the original data distribution in latent space. We instantiate our proposed framework with three popular NAS algorithms: DARTS, ProxylessNAS and SPOS. Surprisingly, our results demonstrate that the architectures discovered by searching with our synthetic data achieve accuracy that is comparable to, or even higher than, architectures discovered by searching from the original ones, for the first time, deriving the conclusion that NAS can be done effectively with no need of access to the original or called natural data if the synthesis method is well designed.

preprint2022arXiv

Learning from Mistakes -- A Framework for Neural Architecture Search

Learning from one's mistakes is an effective human learning technique where the learners focus more on the topics where mistakes were made, so as to deepen their understanding. In this paper, we investigate if this human learning strategy can be applied in machine learning. We propose a novel machine learning method called Learning From Mistakes (LFM), wherein the learner improves its ability to learn by focusing more on the mistakes during revision. We formulate LFM as a three-stage optimization problem: 1) learner learns; 2) learner re-learns focusing on the mistakes, and; 3) learner validates its learning. We develop an efficient algorithm to solve the LFM problem. We apply the LFM framework to neural architecture search on CIFAR-10, CIFAR-100, and Imagenet. Experimental results strongly demonstrate the effectiveness of our model.

preprint2022arXiv

Multimodal Machine Learning for Automated ICD Coding

This study presents a multimodal machine learning model to predict ICD-10 diagnostic codes. We developed separate machine learning models that can handle data from different modalities, including unstructured text, semi-structured text and structured tabular data. We further employed an ensemble method to integrate all modality-specific models to generate ICD-10 codes. Key evidence was also extracted to make our prediction more convincing and explainable. We used the Medical Information Mart for Intensive Care III (MIMIC -III) dataset to validate our approach. For ICD code prediction, our best-performing model (micro-F1 = 0.7633, micro-AUC = 0.9541) significantly outperforms other baseline models including TF-IDF (micro-F1 = 0.6721, micro-AUC = 0.7879) and Text-CNN model (micro-F1 = 0.6569, micro-AUC = 0.9235). For interpretability, our approach achieves a Jaccard Similarity Coefficient (JSC) of 0.1806 on text data and 0.3105 on tabular data, where well-trained physicians achieve 0.2780 and 0.5002 respectively.

preprint2022arXiv

Negational Symmetry of Quantum Neural Networks for Binary Pattern Classification

Entanglement is a physical phenomenon, which has fueled recent successes of quantum algorithms. Although quantum neural networks (QNNs) have shown promising results in solving simple machine learning tasks recently, for the time being, the effect of entanglement in QNNs and the behavior of QNNs in binary pattern classification are still underexplored. In this work, we provide some theoretical insight into the properties of QNNs by presenting and analyzing a new form of invariance embedded in QNNs for both quantum binary classification and quantum representation learning, which we term negational symmetry. Given a quantum binary signal and its negational counterpart where a bitwise NOT operation is applied to each quantum bit of the binary signal, a QNN outputs the same logits. That is to say, QNNs cannot differentiate a quantum binary signal and its negational counterpart in a binary classification task. We further empirically evaluate the negational symmetry of QNNs in binary pattern classification tasks using Google's quantum computing framework. The theoretical and experimental results suggest that negational symmetry is a fundamental property of QNNs, which is not shared by classical models. Our findings also imply that negational symmetry is a double-edged sword in practical quantum applications.

preprint2022arXiv

Nonuniform-to-Uniform Quantization: Towards Accurate Quantization via Generalized Straight-Through Estimation

The nonuniform quantization strategy for compressing neural networks usually achieves better performance than its counterpart, i.e., uniform strategy, due to its superior representational capacity. However, many nonuniform quantization methods overlook the complicated projection process in implementing the nonuniformly quantized weights/activations, which incurs non-negligible time and space overhead in hardware deployment. In this study, we propose Nonuniform-to-Uniform Quantization (N2UQ), a method that can maintain the strong representation ability of nonuniform methods while being hardware-friendly and efficient as the uniform quantization for model inference. We achieve this through learning the flexible in-equidistant input thresholds to better fit the underlying distribution while quantizing these real-valued inputs into equidistant output levels. To train the quantized network with learnable input thresholds, we introduce a generalized straight-through estimator (G-STE) for intractable backward derivative calculation w.r.t. threshold parameters. Additionally, we consider entropy preserving regularization to further reduce information loss in weight quantization. Even under this adverse constraint of imposing uniformly quantized weights and activations, our N2UQ outperforms state-of-the-art nonuniform quantization methods by 0.5~1.7 on ImageNet, demonstrating the contribution of N2UQ design. Code and models are available at: https://github.com/liuzechun/Nonuniform-to-Uniform-Quantization.

preprint2022arXiv

Rare Gems: Finding Lottery Tickets at Initialization

Large neural networks can be pruned to a small fraction of their original size, with little loss in accuracy, by following a time-consuming "train, prune, re-train" approach. Frankle & Carbin conjecture that we can avoid this by training "lottery tickets", i.e., special sparse subnetworks found at initialization, that can be trained to high accuracy. However, a subsequent line of work by Frankle et al. and Su et al. presents concrete evidence that current algorithms for finding trainable networks at initialization, fail simple baseline comparisons, e.g., against training random sparse subnetworks. Finding lottery tickets that train to better accuracy compared to simple baselines remains an open problem. In this work, we resolve this open problem by proposing Gem-Miner which finds lottery tickets at initialization that beat current baselines. Gem-Miner finds lottery tickets trainable to accuracy competitive or better than Iterative Magnitude Pruning (IMP), and does so up to $19\times$ faster.

preprint2022arXiv

SDQ: Stochastic Differentiable Quantization with Mixed Precision

In order to deploy deep models in a computationally efficient manner, model quantization approaches have been frequently used. In addition, as new hardware that supports mixed bitwidth arithmetic operations, recent research on mixed precision quantization (MPQ) begins to fully leverage the capacity of representation by searching optimized bitwidths for different layers and modules in a network. However, previous studies mainly search the MPQ strategy in a costly scheme using reinforcement learning, neural architecture search, etc., or simply utilize partial prior knowledge for bitwidth assignment, which might be biased and sub-optimal. In this work, we present a novel Stochastic Differentiable Quantization (SDQ) method that can automatically learn the MPQ strategy in a more flexible and globally-optimized space with smoother gradient approximation. Particularly, Differentiable Bitwidth Parameters (DBPs) are employed as the probability factors in stochastic quantization between adjacent bitwidth choices. After the optimal MPQ strategy is acquired, we further train our network with entropy-aware bin regularization and knowledge distillation. We extensively evaluate our method for several networks on different hardware (GPUs and FPGA) and datasets. SDQ outperforms all state-of-the-art mixed or single precision quantization with a lower bitwidth and is even better than the full-precision counterparts across various ResNet and MobileNet families, demonstrating the effectiveness and superiority of our method.

preprint2022arXiv

Sliced Recursive Transformer

We present a neat yet effective recursive operation on vision transformers that can improve parameter utilization without involving additional parameters. This is achieved by sharing weights across the depth of transformer networks. The proposed method can obtain a substantial gain (~2%) simply using naive recursive operation, requires no special or sophisticated knowledge for designing principles of networks, and introduces minimal computational overhead to the training procedure. To reduce the additional computation caused by recursive operation while maintaining the superior accuracy, we propose an approximating method through multiple sliced group self-attentions across recursive layers which can reduce the cost consumption by 10~30% with minimal performance loss. We call our model Sliced Recursive Transformer (SReT), a novel and parameter-efficient vision transformer design that is compatible with a broad range of other designs for efficient ViT architectures. Our best model establishes significant improvement on ImageNet-1K over state-of-the-art methods while containing fewer parameters. The proposed weight sharing mechanism by sliced recursion structure allows us to build a transformer with more than 100 or even 1000 shared layers with ease while keeping a compact size (13~15M), to avoid optimization difficulties when the model is too large. The flexible scalability has shown great potential for scaling up models and constructing extremely deep vision transformers. Code is available at https://github.com/szq0214/SReT.

preprint2022arXiv

Stochastic Neural Networks with Infinite Width are Deterministic

This work theoretically studies stochastic neural networks, a main type of neural network in use. We prove that as the width of an optimized stochastic neural network tends to infinity, its predictive variance on the training set decreases to zero. Our theory justifies the common intuition that adding stochasticity to the model can help regularize the model by introducing an averaging effect. Two common examples that our theory can be relevant to are neural networks with dropout and Bayesian latent variable models in a special limit. Our result thus helps better understand how stochasticity affects the learning of neural networks and potentially design better architectures for practical problems.

preprint2022arXiv

Toward Learning Human-aligned Cross-domain Robust Models by Countering Misaligned Features

Machine learning has demonstrated remarkable prediction accuracy over i.i.d data, but the accuracy often drops when tested with data from another distribution. In this paper, we aim to offer another view of this problem in a perspective assuming the reason behind this accuracy drop is the reliance of models on the features that are not aligned well with how a data annotator considers similar across these two datasets. We refer to these features as misaligned features. We extend the conventional generalization error bound to a new one for this setup with the knowledge of how the misaligned features are associated with the label. Our analysis offers a set of techniques for this problem, and these techniques are naturally linked to many previous methods in robust machine learning literature. We also compared the empirical strength of these methods demonstrated the performance when these previous techniques are combined, with an implementation available at https://github.com/OoDBag/WR

preprint2022arXiv

Un-Mix: Rethinking Image Mixtures for Unsupervised Visual Representation Learning

The recently advanced unsupervised learning approaches use the siamese-like framework to compare two "views" from the same image for learning representations. Making the two views distinctive is a core to guarantee that unsupervised methods can learn meaningful information. However, such frameworks are sometimes fragile on overfitting if the augmentations used for generating two views are not strong enough, causing the over-confident issue on the training data. This drawback hinders the model from learning subtle variance and fine-grained information. To address this, in this work we aim to involve the distance concept on label space in the unsupervised learning and let the model be aware of the soft degree of similarity between positive or negative pairs through mixing the input data space, to further work collaboratively for the input and loss spaces. Despite its conceptual simplicity, we show empirically that with the solution -- Unsupervised image mixtures (Un-Mix), we can learn subtler, more robust and generalized representations from the transformed input and corresponding new label space. Extensive experiments are conducted on CIFAR-10, CIFAR-100, STL-10, Tiny ImageNet and standard ImageNet with popular unsupervised methods SimCLR, BYOL, MoCo V1&V2, SwAV, etc. Our proposed image mixture and label assignment strategy can obtain consistent improvement by 1~3% following exactly the same hyperparameters and training procedures of the base methods. Code is publicly available at https://github.com/szq0214/Un-Mix.

preprint2022arXiv

Vision Transformer Slimming: Multi-Dimension Searching in Continuous Optimization Space

This paper explores the feasibility of finding an optimal sub-model from a vision transformer and introduces a pure vision transformer slimming (ViT-Slim) framework. It can search a sub-structure from the original model end-to-end across multiple dimensions, including the input tokens, MHSA and MLP modules with state-of-the-art performance. Our method is based on a learnable and unified $\ell_1$ sparsity constraint with pre-defined factors to reflect the global importance in the continuous searching space of different dimensions. The searching process is highly efficient through a single-shot training scheme. For instance, on DeiT-S, ViT-Slim only takes ~43 GPU hours for the searching process, and the searched structure is flexible with diverse dimensionalities in different modules. Then, a budget threshold is employed according to the requirements of accuracy-FLOPs trade-off on running devices, and a re-training process is performed to obtain the final model. The extensive experiments show that our ViT-Slim can compress up to 40% of parameters and 40% FLOPs on various vision transformers while increasing the accuracy by ~0.6% on ImageNet. We also demonstrate the advantage of our searched models on several downstream datasets. Our code is available at https://github.com/Arnav0400/ViT-Slim.

preprint2021arXiv

Federated Learning via Posterior Averaging: A New Perspective and Practical Algorithms

Federated learning is typically approached as an optimization problem, where the goal is to minimize a global loss function by distributing computation across client devices that possess local data and specify different parts of the global objective. We present an alternative perspective and formulate federated learning as a posterior inference problem, where the goal is to infer a global posterior distribution by having client devices each infer the posterior of their local data. While exact inference is often intractable, this perspective provides a principled way to search for global optima in federated settings. Further, starting with the analysis of federated quadratic objectives, we develop a computation- and communication-efficient approximate posterior inference algorithm -- federated posterior averaging (FedPA). Our algorithm uses MCMC for approximate inference of local posteriors on the clients and efficiently communicates their statistics to the server, where the latter uses them to refine a global estimate of the posterior mode. Finally, we show that FedPA generalizes federated averaging (FedAvg), can similarly benefit from adaptive optimizers, and yields state-of-the-art results on four realistic and challenging benchmarks, converging faster, to better optima.

preprint2021arXiv

Interactive Weak Supervision: Learning Useful Heuristics for Data Labeling

Obtaining large annotated datasets is critical for training successful machine learning models and it is often a bottleneck in practice. Weak supervision offers a promising alternative for producing labeled datasets without ground truth annotations by generating probabilistic labels using multiple noisy heuristics. This process can scale to large datasets and has demonstrated state of the art performance in diverse domains such as healthcare and e-commerce. One practical issue with learning from user-generated heuristics is that their creation requires creativity, foresight, and domain expertise from those who hand-craft them, a process which can be tedious and subjective. We develop the first framework for interactive weak supervision in which a method proposes heuristics and learns from user feedback given on each proposed heuristic. Our experiments demonstrate that only a small number of feedback iterations are needed to train models that achieve highly competitive test set performance without access to ground truth training labels. We conduct user studies, which show that users are able to effectively provide feedback on heuristics and that test set results track the performance of simulated oracles.

preprint2021arXiv

On Data Efficiency of Meta-learning

Meta-learning has enabled learning statistical models that can be quickly adapted to new prediction tasks. Motivated by use-cases in personalized federated learning, we study the often overlooked aspect of the modern meta-learning algorithms -- their data efficiency. To shed more light on which methods are more efficient, we use techniques from algorithmic stability to derive bounds on the transfer risk that have important practical implications, indicating how much supervision is needed and how it must be allocated for each method to attain the desired level of generalization. Further, we introduce a new simple framework for evaluating meta-learning methods under a limit on the available supervision, conduct an empirical study of MAML, Reptile, and Protonets, and demonstrate the differences in the behavior of these methods on few-shot and federated learning benchmarks. Finally, we propose active meta-learning, which incorporates active data selection into learning-to-learn, leading to better performance of all methods in the limited supervision regime.

preprint2020arXiv

Efficient Exploration via State Marginal Matching

Exploration is critical to a reinforcement learning agent's performance in its given environment. Prior exploration methods are often based on using heuristic auxiliary predictions to guide policy behavior, lacking a mathematically-grounded objective with clear properties. In contrast, we recast exploration as a problem of State Marginal Matching (SMM), where we aim to learn a policy for which the state marginal distribution matches a given target state distribution. The target distribution is a uniform distribution in most cases, but can incorporate prior knowledge if available. In effect, SMM amortizes the cost of learning to explore in a given environment. The SMM objective can be viewed as a two-player, zero-sum game between a state density model and a parametric policy, an idea that we use to build an algorithm for optimizing the SMM objective. Using this formalism, we further demonstrate that prior work approximately maximizes the SMM objective, offering an explanation for the success of these methods. On both simulated and real-world tasks, we demonstrate that agents that directly optimize the SMM objective explore faster and adapt more quickly to new tasks as compared to prior exploration methods.

preprint2020arXiv

Harnessing Deep Neural Networks with Logic Rules

Combining deep neural networks with structured logic rules is desirable to harness flexibility and reduce uninterpretability of the neural models. We propose a general framework capable of enhancing various types of neural networks (e.g., CNNs and RNNs) with declarative first-order logic rules. Specifically, we develop an iterative distillation method that transfers the structured information of logic rules into the weights of neural networks. We deploy the framework on a CNN for sentiment analysis, and an RNN for named entity recognition. With a few highly intuitive rules, we obtain substantial improvements and achieve state-of-the-art or comparable results to previous best-performing systems.

preprint2020arXiv

Learning from Imperfect Annotations

Many machine learning systems today are trained on large amounts of human-annotated data. Data annotation tasks that require a high level of competency make data acquisition expensive, while the resulting labels are often subjective, inconsistent, and may contain a variety of human biases. To improve the data quality, practitioners often need to collect multiple annotations per example and aggregate them before training models. Such a multi-stage approach results in redundant annotations and may often produce imperfect "ground truth" that may limit the potential of training accurate machine learning models. We propose a new end-to-end framework that enables us to: (i) merge the aggregation step with model training, thus allowing deep learning systems to learn to predict ground truth estimates directly from the available data, and (ii) model difficulties of examples and learn representations of the annotators that allow us to estimate and take into account their competencies. Our approach is general and has many applications, including training more accurate models on crowdsourced data, ensemble learning, as well as classifier accuracy estimation from unlabeled data. We conduct an extensive experimental evaluation of our method on 5 crowdsourcing datasets of varied difficulty and show accuracy gains of up to 25% over the current state-of-the-art approaches for aggregating annotations, as well as significant reductions in the required annotation redundancy.

preprint2020arXiv

Methods for comparing uncertainty quantifications for material property predictions

Data science and informatics tools have been proliferating recently within the computational materials science and catalysis fields. This proliferation has spurned the creation of various frameworks for automated materials screening, discovery, and design. Underpinning these frameworks are surrogate models with uncertainty estimates on their predictions. These uncertainty estimates are instrumental for determining which materials to screen next, but the computational catalysis field does not yet have a standard procedure for judging the quality of such uncertainty estimates. Here we present a suite of figures and performance metrics derived from the machine learning community that can be used to judge the quality of such uncertainty estimates. This suite probes the accuracy, calibration, and sharpness of a model quantitatively. We then show a case study where we judge various methods for predicting density-functional-theory-calculated adsorption energies. Of the methods studied here, we find that the best performer is a model where a convolutional neural network is used to supply features to a Gaussian process regressor, which then makes predictions of adsorption energies along with corresponding uncertainty estimates.

preprint2020arXiv

On the Generation of Medical Dialogues for COVID-19

Under the pandemic of COVID-19, people experiencing COVID19-related symptoms or exposed to risk factors have a pressing need to consult doctors. Due to hospital closure, a lot of consulting services have been moved online. Because of the shortage of medical professionals, many people cannot receive online consultations timely. To address this problem, we aim to develop a medical dialogue system that can provide COVID19-related consultations. We collected two dialogue datasets -- CovidDialog -- (in English and Chinese respectively) containing conversations between doctors and patients about COVID-19. On these two datasets, we train several dialogue generation models based on Transformer, GPT, and BERT-GPT. Since the two COVID-19 dialogue datasets are small in size, which bear high risk of overfitting, we leverage transfer learning to mitigate data deficiency. Specifically, we take the pretrained models of Transformer, GPT, and BERT-GPT on dialog datasets and other large-scale texts, then finetune them on our CovidDialog tasks. We perform both automatic and human evaluation of responses generated by these models. The results show that the generated responses are promising in being doctor-like, relevant to the conversation history, and clinically informative. The data and code are available at https://github.com/UCSD-AI4H/COVID-Dialogue.

preprint2020arXiv

PathVQA: 30000+ Questions for Medical Visual Question Answering

Is it possible to develop an "AI Pathologist" to pass the board-certified examination of the American Board of Pathology? To achieve this goal, the first step is to create a visual question answering (VQA) dataset where the AI agent is presented with a pathology image together with a question and is asked to give the correct answer. Our work makes the first attempt to build such a dataset. Different from creating general-domain VQA datasets where the images are widely accessible and there are many crowdsourcing workers available and capable of generating question-answer pairs, developing a medical VQA dataset is much more challenging. First, due to privacy concerns, pathology images are usually not publicly available. Second, only well-trained pathologists can understand pathology images, but they barely have time to help create datasets for AI research. To address these challenges, we resort to pathology textbooks and online digital libraries. We develop a semi-automated pipeline to extract pathology images and captions from textbooks and generate question-answer pairs from captions using natural language processing. We collect 32,799 open-ended questions from 4,998 pathology images where each question is manually checked to ensure correctness. To our best knowledge, this is the first dataset for pathology VQA. Our dataset will be released publicly to promote research in medical VQA.

preprint2020arXiv

Show, Describe and Conclude: On Exploiting the Structure Information of Chest X-Ray Reports

Chest X-Ray (CXR) images are commonly used for clinical screening and diagnosis. Automatically writing reports for these images can considerably lighten the workload of radiologists for summarizing descriptive findings and conclusive impressions. The complex structures between and within sections of the reports pose a great challenge to the automatic report generation. Specifically, the section Impression is a diagnostic summarization over the section Findings; and the appearance of normality dominates each section over that of abnormality. Existing studies rarely explore and consider this fundamental structure information. In this work, we propose a novel framework that exploits the structure information between and within report sections for generating CXR imaging reports. First, we propose a two-stage strategy that explicitly models the relationship between Findings and Impression. Second, we design a novel cooperative multi-agent system that implicitly captures the imbalanced distribution between abnormality and normality. Experiments on two CXR report datasets show that our method achieves state-of-the-art performance in terms of various evaluation metrics. Our results expose that the proposed approach is able to generate high-quality medical reports through integrating the structure information.

preprint2020arXiv

XRayGAN: Consistency-preserving Generation of X-ray Images from Radiology Reports

To effectively train medical students to become qualified radiologists, a large number of X-ray images collected from patients with diverse medical conditions are needed. However, due to data privacy concerns, such images are typically difficult to obtain. To address this problem, we develop methods to generate view-consistent, high-fidelity, and high-resolution X-ray images from radiology reports to facilitate radiology training of medical students. This task is presented with several challenges. First, from a single report, images with different views (e.g., frontal, lateral) need to be generated. How to ensure consistency of these images (i.e., make sure they are about the same patient)? Second, X-ray images are required to have high resolution. Otherwise, many details of diseases would be lost. How to generate high-resolutions images? Third, radiology reports are long and have complicated structure. How to effectively understand their semantics to generate high-fidelity images that accurately reflect the contents of the reports? To address these three challenges, we propose an XRayGAN composed of three modules: (1) a view consistency network that maximizes the consistency between generated frontal-view and lateral-view images; (2) a multi-scale conditional GAN that progressively generates a cascade of images with increasing resolution; (3) a hierarchical attentional encoder that learns the latent semantics of a radiology report by capturing its hierarchical linguistic structure and various levels of clinical importance of words and sentences. Experiments on two radiology datasets demonstrate the effectiveness of our methods. To our best knowledge, this work represents the first one generating consistent and high-resolution X-ray images from radiology reports. The code is available at https://github.com/UCSD-AI4H/XRayGAN.

preprint2016arXiv

Seeing the Forest from the Trees in Two Looks: Matrix Sketching by Cascaded Bilateral Sampling

Matrix sketching is aimed at finding close approximations of a matrix by factors of much smaller dimensions, which has important applications in optimization and machine learning. Given a matrix A of size m by n, state-of-the-art randomized algorithms take O(m * n) time and space to obtain its low-rank decomposition. Although quite useful, the need to store or manipulate the entire matrix makes it a computational bottleneck for truly large and dense inputs. Can we sketch an m-by-n matrix in O(m + n) cost by accessing only a small fraction of its rows and columns, without knowing anything about the remaining data? In this paper, we propose the cascaded bilateral sampling (CABS) framework to solve this problem. We start from demonstrating how the approximation quality of bilateral matrix sketching depends on the encoding powers of sampling. In particular, the sampled rows and columns should correspond to the code-vectors in the ground truth decompositions. Motivated by this analysis, we propose to first generate a pilot-sketch using simple random sampling, and then pursue more advanced, "follow-up" sampling on the pilot-sketch factors seeking maximal encoding powers. In this cascading process, the rise of approximation quality is shown to be lower-bounded by the improvement of encoding powers in the follow-up sampling step, thus theoretically guarantees the algorithmic boosting property. Computationally, our framework only takes linear time and space, and at the same time its performance rivals the quality of state-of-the-art algorithms consuming a quadratic amount of resources. Empirical evaluations on benchmark data fully demonstrate the potential of our methods in large scale matrix sketching and related areas.

preprint2015arXiv

CryptGraph: Privacy Preserving Graph Analytics on Encrypted Graph

Many graph mining and analysis services have been deployed on the cloud, which can alleviate users from the burden of implementing and maintaining graph algorithms. However, putting graph analytics on the cloud can invade users' privacy. To solve this problem, we propose CryptGraph, which runs graph analytics on encrypted graph to preserve the privacy of both users' graph data and the analytic results. In CryptGraph, users encrypt their graphs before uploading them to the cloud. The cloud runs graph analysis on the encrypted graphs and obtains results which are also in encrypted form that the cloud cannot decipher. During the process of computing, the encrypted graphs are never decrypted on the cloud side. The encrypted results are sent back to users and users perform the decryption to obtain the plaintext results. In this process, users' graphs and the analytics results are both encrypted and the cloud knows neither of them. Thereby, users' privacy can be strongly protected. Meanwhile, with the help of homomorphic encryption, the results analyzed from the encrypted graphs are guaranteed to be correct. In this paper, we present how to encrypt a graph using homomorphic encryption and how to query the structure of an encrypted graph by computing polynomials. To solve the problem that certain operations are not executable on encrypted graphs, we propose hard computation outsourcing to seek help from users. Using two graph algorithms as examples, we show how to apply our methods to perform analytics on encrypted graphs. Experiments on two datasets demonstrate the correctness and feasibility of our methods.

preprint2015arXiv

Distributed Machine Learning via Sufficient Factor Broadcasting

Matrix-parametrized models, including multiclass logistic regression and sparse coding, are used in machine learning (ML) applications ranging from computer vision to computational biology. When these models are applied to large-scale ML problems starting at millions of samples and tens of thousands of classes, their parameter matrix can grow at an unexpected rate, resulting in high parameter synchronization costs that greatly slow down distributed learning. To address this issue, we propose a Sufficient Factor Broadcasting (SFB) computation model for efficient distributed learning of a large family of matrix-parameterized models, which share the following property: the parameter update computed on each data sample is a rank-1 matrix, i.e., the outer product of two "sufficient factors" (SFs). By broadcasting the SFs among worker machines and reconstructing the update matrices locally at each worker, SFB improves communication efficiency --- communication costs are linear in the parameter matrix's dimensions, rather than quadratic --- without affecting computational correctness. We present a theoretical convergence analysis of SFB, and empirically corroborate its efficiency on four different matrix-parametrized ML models.

preprint2015arXiv

Distributed Machine Learning via Sufficient Factor Broadcasting

Matrix-parametrized models, including multiclass logistic regression and sparse coding, are used in machine learning (ML) applications ranging from computer vision to computational biology. When these models are applied to large-scale ML problems starting at millions of samples and tens of thousands of classes, their parameter matrix can grow at an unexpected rate, resulting in high parameter synchronization costs that greatly slow down distributed learning. To address this issue, we propose a Sufficient Factor Broadcasting (SFB) computation model for efficient distributed learning of a large family of matrix-parameterized models, which share the following property: the parameter update computed on each data sample is a rank-1 matrix, i.e., the outer product of two "sufficient factors" (SFs). By broadcasting the SFs among worker machines and reconstructing the update matrices locally at each worker, SFB improves communication efficiency --- communication costs are linear in the parameter matrix's dimensions, rather than quadratic --- without affecting computational correctness. We present a theoretical convergence analysis of SFB, and empirically corroborate its efficiency on four different matrix-parametrized ML models.

preprint2015arXiv

Embarrassingly Parallel Variational Inference in Nonconjugate Models

We develop a parallel variational inference (VI) procedure for use in data-distributed settings, where each machine only has access to a subset of data and runs VI independently, without communicating with other machines. This type of "embarrassingly parallel" procedure has recently been developed for MCMC inference algorithms; however, in many cases it is not possible to directly extend this procedure to VI methods without requiring certain restrictive exponential family conditions on the form of the model. Furthermore, most existing (nonparallel) VI methods are restricted to use on conditionally conjugate models, which limits their applicability. To combat these issues, we make use of the recently proposed nonparametric VI to facilitate an embarrassingly parallel VI procedure that can be applied to a wider scope of models, including to nonconjugate models. We derive our embarrassingly parallel VI algorithm, analyze our method theoretically, and demonstrate our method empirically on a few nonconjugate models.

preprint2015arXiv

On the Generalization Error Bounds of Neural Networks under Diversity-Inducing Mutual Angular Regularization

Recently diversity-inducing regularization methods for latent variable models (LVMs), which encourage the components in LVMs to be diverse, have been studied to address several issues involved in latent variable modeling: (1) how to capture long-tail patterns underlying data; (2) how to reduce model complexity without sacrificing expressivity; (3) how to improve the interpretability of learned patterns. While the effectiveness of diversity-inducing regularizers such as the mutual angular regularizer has been demonstrated empirically, a rigorous theoretical analysis of them is still missing. In this paper, we aim to bridge this gap and analyze how the mutual angular regularizer (MAR) affects the generalization performance of supervised LVMs. We use neural network (NN) as a model instance to carry out the study and the analysis shows that increasing the diversity of hidden units in NN would reduce estimation error and increase approximation error. In addition to theoretical analysis, we also present empirical study which demonstrates that the MAR can greatly improve the performance of NN and the empirical observations are in accordance with the theoretical analysis.

preprint2015arXiv

Poseidon: A System Architecture for Efficient GPU-based Deep Learning on Multiple Machines

Deep learning (DL) has achieved notable successes in many machine learning tasks. A number of frameworks have been developed to expedite the process of designing and training deep neural networks (DNNs), such as Caffe, Torch and Theano. Currently they can harness multiple GPUs on a single machine, but are unable to use GPUs that are distributed across multiple machines; as even average-sized DNNs can take days to train on a single GPU with 100s of GBs to TBs of data, distributed GPUs present a prime opportunity for scaling up DL. However, the limited bandwidth available on commodity Ethernet networks presents a bottleneck to distributed GPU training, and prevents its trivial realization. To investigate how to adapt existing frameworks to efficiently support distributed GPUs, we propose Poseidon, a scalable system architecture for distributed inter-machine communication in existing DL frameworks. We integrate Poseidon with Caffe and evaluate its performance at training DNNs for object recognition. Poseidon features three key contributions that accelerate DNN training on clusters: (1) a three-level hybrid architecture that allows Poseidon to support both CPU-only and GPU-equipped clusters, (2) a distributed wait-free backpropagation (DWBP) algorithm to improve GPU utilization and to balance communication, and (3) a structure-aware communication protocol (SACP) to minimize communication overheads. We empirically show that Poseidon converges to same objectives as a single machine, and achieves state-of-art training speedup across multiple models and well-established datasets using a commodity GPU cluster of 8 nodes (e.g. 4.5x speedup on AlexNet, 4x on GoogLeNet, 4x on CIFAR-10). On the much larger ImageNet22K dataset, Poseidon with 8 nodes achieves better speedup and competitive accuracy to recent CPU-based distributed systems such as Adam and Le et al., which use 10s to 1000s of nodes.

preprint2015arXiv

Scalable Gaussian Processes for Characterizing Multidimensional Change Surfaces

We present a scalable Gaussian process model for identifying and characterizing smooth multidimensional changepoints, and automatically learning changes in expressive covariance structure. We use Random Kitchen Sink features to flexibly define a change surface in combination with expressive spectral mixture kernels to capture the complex statistical structure. Finally, through the use of novel methods for additive non-separable kernels, we can scale the model to large datasets. We demonstrate the model on numerical and real world data, including a large spatio-temporal disease dataset where we identify previously unknown heterogeneous changes in space and time.

preprint2014arXiv

Asymptotically Exact, Embarrassingly Parallel MCMC

Communication costs, resulting from synchronization requirements during learning, can greatly slow down many parallel machine learning algorithms. In this paper, we present a parallel Markov chain Monte Carlo (MCMC) algorithm in which subsets of data are processed independently, with very little communication. First, we arbitrarily partition data onto multiple machines. Then, on each machine, any classical MCMC method (e.g., Gibbs sampling) may be used to draw samples from a posterior distribution given the data subset. Finally, the samples from each machine are combined to form samples from the full posterior. This embarrassingly parallel algorithm allows each machine to act independently on a subset of the data (without communication) until the final combination stage. We prove that our algorithm generates asymptotically exact samples and empirically demonstrate its ability to parallelize burn-in and sampling in several models.

preprint2014arXiv

Cauchy Principal Component Analysis

Principal Component Analysis (PCA) has wide applications in machine learning, text mining and computer vision. Classical PCA based on a Gaussian noise model is fragile to noise of large magnitude. Laplace noise assumption based PCA methods cannot deal with dense noise effectively. In this paper, we propose Cauchy Principal Component Analysis (Cauchy PCA), a very simple yet effective PCA method which is robust to various types of noise. We utilize Cauchy distribution to model noise and derive Cauchy PCA under the maximum likelihood estimation (MLE) framework with low rank constraint. Our method can robustly estimate the low rank matrix regardless of whether noise is large or small, dense or sparse. We analyze the robustness of Cauchy PCA from a robust statistics view and present an efficient singular value projection optimization method. Experimental results on both simulated data and real applications demonstrate the robustness of Cauchy PCA to various noise patterns.

preprint2014arXiv

Fast Distribution To Real Regression

We study the problem of distribution to real-value regression, where one aims to regress a mapping $f$ that takes in a distribution input covariate $P\in \mathcal{I}$ (for a non-parametric family of distributions $\mathcal{I}$) and outputs a real-valued response $Y=f(P) + ε$. This setting was recently studied, and a "Kernel-Kernel" estimator was introduced and shown to have a polynomial rate of convergence. However, evaluating a new prediction with the Kernel-Kernel estimator scales as $Ω(N)$. This causes the difficult situation where a large amount of data may be necessary for a low estimation risk, but the computation cost of estimation becomes infeasible when the data-set is too large. To this end, we propose the Double-Basis estimator, which looks to alleviate this big data problem in two ways: first, the Double-Basis estimator is shown to have a computation complexity that is independent of the number of of instances $N$ when evaluating new predictions after training; secondly, the Double-Basis estimator is shown to have a fast rate of convergence for a general class of mappings $f\in\mathcal{F}$.

preprint2014arXiv

Fast Function to Function Regression

We analyze the problem of regression when both input covariates and output responses are functions from a nonparametric function class. Function to function regression (FFR) covers a large range of interesting applications including time-series prediction problems, and also more general tasks like studying a mapping between two separate types of distributions. However, previous nonparametric estimators for FFR type problems scale badly computationally with the number of input/output pairs in a data-set. Given the complexity of a mapping between general functions it may be necessary to consider large data-sets in order to achieve a low estimation risk. To address this issue, we develop a novel scalable nonparametric estimator, the Triple-Basis Estimator (3BE), which is capable of operating over datasets with many instances. To the best of our knowledge, the 3BE is the first nonparametric FFR estimator that can scale to massive datasets. We analyze the 3BE's risk and derive an upperbound rate. Furthermore, we show an improvement of several orders of magnitude in terms of prediction speed and a reduction in error over previous estimators in various real-world data-sets.

preprint2014arXiv

Large Scale Distributed Distance Metric Learning

In large scale machine learning and data mining problems with high feature dimensionality, the Euclidean distance between data points can be uninformative, and Distance Metric Learning (DML) is often desired to learn a proper similarity measure (using side information such as example data pairs being similar or dissimilar). However, high dimensionality and large volume of pairwise constraints in modern big data can lead to prohibitive computational cost for both the original DML formulation in Xing et al. (2002) and later extensions. In this paper, we present a distributed algorithm for DML, and a large-scale implementation on a parameter server architecture. Our approach builds on a parallelizable reformulation of Xing et al. (2002), and an asynchronous stochastic gradient descent optimization procedure. To our knowledge, this is the first distributed solution to DML, and we show that, on a system with 256 CPU cores, our program is able to complete a DML task on a dataset with 1 million data points, 22-thousand features, and 200 million labeled data pairs, in 15 hours; and the learned metric shows great effectiveness in properly measuring distances.

preprint2014arXiv

Nonparametric Latent Tree Graphical Models: Inference, Estimation, and Structure Learning

Tree structured graphical models are powerful at expressing long range or hierarchical dependency among many variables, and have been widely applied in different areas of computer science and statistics. However, existing methods for parameter estimation, inference, and structure learning mainly rely on the Gaussian or discrete assumptions, which are restrictive under many applications. In this paper, we propose new nonparametric methods based on reproducing kernel Hilbert space embeddings of distributions that can recover the latent tree structures, estimate the parameters, and perform inference for high dimensional continuous and non-Gaussian variables. The usefulness of the proposed methods are illustrated by thorough numerical results.

preprint2013arXiv

Community Specific Temporal Topic Discovery from Social Media

Studying temporal dynamics of topics in social media is very useful to understand online user behaviors. Most of the existing work on this subject usually monitors the global trends, ignoring variation among communities. Since users from different communities tend to have varying tastes and interests, capturing community-level temporal change can improve the understanding and management of social content. Additionally, it can further facilitate the applications such as community discovery, temporal prediction and online marketing. However, this kind of extraction becomes challenging due to the intricate interactions between community and topic, and intractable computational complexity. In this paper, we take a unified solution towards the community-level topic dynamic extraction. A probabilistic model, CosTot (Community Specific Topics-over-Time) is proposed to uncover the hidden topics and communities, as well as capture community-specific temporal dynamics. Specifically, CosTot considers text, time, and network information simultaneously, and well discovers the interactions between community and topic over time. We then discuss the approximate inference implementation to enable scalable computation of model parameters, especially for large social data. Based on this, the application layer support for multi-scale temporal analysis and community exploration is also investigated. We conduct extensive experimental studies on a large real microblog dataset, and demonstrate the superiority of proposed model on tasks of time stamp prediction, link prediction and topic perplexity.

preprint2012arXiv

Group Sparse Additive Models

We consider the problem of sparse variable selection in nonparametric additive models, with the prior knowledge of the structure among the covariates to encourage those variables within a group to be selected jointly. Previous works either study the group sparsity in the parametric setting (e.g., group lasso), or address the problem in the non-parametric setting without exploiting the structural information (e.g., sparse additive models). In this paper, we present a new method, called group sparse additive models (GroupSpAM), which can handle group sparsity in additive models. We generalize the l1/l2 norm to Hilbert spaces as the sparsity-inducing penalty in GroupSpAM. Moreover, we derive a novel thresholding condition for identifying the functional sparsity at the group level, and propose an efficient block coordinate descent algorithm for constructing the estimate. We demonstrate by simulation that GroupSpAM substantially outperforms the competing methods in terms of support recovery and prediction accuracy in additive models, and also conduct a comparative experiment on a real breast cancer dataset.