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Wenjie Chen

Wenjie Chen contributes to research discovery and scholarly infrastructure.

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Published work

6 published item(s)

preprint2026arXiv

MSR:Hybrid Field Modeling for CT-MRI Rigid-Deformable Registration of the Cervical Spine with an Annotated Dataset

Accurate CT-MRI registration of the cervical spine is essential for preoperative planning because this region is anatomically complex,highly variable,and vulnerable to injury of the vertebral arteries and spinal cord. However,cervical CT-MRI registration remains underexplored,particularly for rigid-deformable hybrid modeling,and the lack of high-quality annotated multimodal data further limits progress. To address these challenges, we construct and release a comprehensively annotated CT-MRI dataset, R-D-Reg, and propose MSR, a rigid-deformable hybrid registration framework for complex joint structures. Specifically, MSR includes a rigid registration module for independent local rigid alignment of individual vertebrae and a deformable registration module with an MSL block that combines Mamba-based global modeling and Swin Transformer-based local modeling through adaptive gating. The rigid and deformable deformation fields are then fused to generate a hybrid field that better preserves local anatomical consistency. The code and dataset are publicly available at https://github.com/ssc1230609-spec/MSR-registration.

preprint2026arXiv

Universal and Experiment-calibrated Prediction of XANES through Crystal Graph Neural Network and Transfer Learning Strategy

Theoretical simulation is helpful for accurate interpretation of experimental X-ray absorption near-edge structure (XANES) spectra that contain rich atomic and electronic structure information of materials. However, current simulation methods are usually too complex to give the needed accuracy and timeliness when a large amount of data need to be analyzed, such as for in-situ characterization of battery materials. To address these problems, artificial intelligence (AI) models have been developed for XANES prediction. However, instead of using experimental XANES data, the existing models are trained using simulated data, resulting in significant discrepancies between the predicted and experimental spectra. Also, the universality across different elements has not been well studied for such models. In this work, we firstly establish a crystal graph neural network, pre-trained on simulated XANES data covering 48 elements, to achieve universal XANES prediction with a low average relative square error of 0.020223; and then utilize transfer learning to calibrate the model using a small experimental XANES dataset. After calibration, the edge energy misalignment error of the predicted S, Ti and Fe K edge XANES is significantly reduced by about 80%. The method demonstrated in this work opens up a new way to achieve fast, universal, and experiment-calibrated XANES prediction.

preprint2021arXiv

A New Knowledge Gradient-based Method for Constrained Bayesian Optimization

Black-box problems are common in real life like structural design, drug experiments, and machine learning. When optimizing black-box systems, decision-makers always consider multiple performances and give the final decision by comprehensive evaluations. Motivated by such practical needs, we focus on constrained black-box problems where the objective and constraints lack known special structure, and evaluations are expensive and even with noise. We develop a novel constrained Bayesian optimization approach based on the knowledge gradient method ($c-\rm{KG}$). A new acquisition function is proposed to determine the next batch of samples considering optimality and feasibility. An unbiased estimator of the gradient of the new acquisition function is derived to implement the $c-\rm{KG}$ approach.

preprint2021arXiv

Passive temperature management based on near-field heat transfer

Thermal or temperature management in modern machines has drawn great attentions in the last decades. The waste heat caused during the machine operation is particularly pernicious for the temperature-dependent electronics and may reduce the apparatus performance and lifetime. To control the operation temperature while maintaining high input powers is often a dilemma. Enormous works have been done for the purpose. Here, a passive temperature management method based on near-field heat transfer is introduced, utilizing graphene-plasmon enhanced evanescence wave tunneling. Within a pump power tolerance range of 0.5-7 KW m-2, the device can automatically regulate its thermal emissivity to quickly acquire thermal homeostasis around a designed temperature. It is compact, fully passive and could be incorporated into chip design. The results pave a promising way for passive thermal management that could be used in modern instruments in particular for vacuum environmental applications.

preprint2020arXiv

Beamforming Optimization for Intelligent Reflecting Surface Assisted MIMO: A Sum-Path-Gain Maximization Approach

Recently, intelligent reflecting surface (IRS) has emerged as an appealing technique that enables wireless communications with low hardware cost and low power consumption. In this letter, we consider an IRS-assisted point-to-point multi-input multi-output (MIMO) system, where a source communicates with its destination with the help of an IRS. Our goal is to maximize the spectral efficiency of this system by jointly optimizing the (active) precoding at the source and the (passive) phase shifters (PSs) at the IRS. However, this turns out to be an intractable mixed integer non-convex optimization problem. To circumvent the intractability, we propose a new sum-path-gain maximization (SPGM) criterion to obtain a high-quality and efficient suboptimal solution to this problem. Specifically, the PSs are first designed based on a simplified optimization problem, which aims to maximize the sum-gains of the spatial paths between the source and the destination. Then, a low-complexity alternating direction method of multipliers (ADMM) algorithm is utilized to solve this simplified problem. Finally, with the above obtained PSs, the source precoding is derived by performing the singular value decomposition (SVD) on the effective channel between the source and the destination. Numerical results demonstrate that the proposed scheme can achieve near-optimal performance.

preprint2020arXiv

Grasping Detection Network with Uncertainty Estimation for Confidence-Driven Semi-Supervised Domain Adaptation

Data-efficient domain adaptation with only a few labelled data is desired for many robotic applications, e.g., in grasping detection, the inference skill learned from a grasping dataset is not universal enough to directly apply on various other daily/industrial applications. This paper presents an approach enabling the easy domain adaptation through a novel grasping detection network with confidence-driven semi-supervised learning, where these two components deeply interact with each other. The proposed grasping detection network specially provides a prediction uncertainty estimation mechanism by leveraging on Feature Pyramid Network (FPN), and the mean-teacher semi-supervised learning utilizes such uncertainty information to emphasizing the consistency loss only for those unlabelled data with high confidence, which we referred it as the confidence-driven mean teacher. This approach largely prevents the student model to learn the incorrect/harmful information from the consistency loss, which speeds up the learning progress and improves the model accuracy. Our results show that the proposed network can achieve high success rate on the Cornell grasping dataset, and for domain adaptation with very limited data, the confidence-driven mean teacher outperforms the original mean teacher and direct training by more than 10% in evaluation loss especially for avoiding the overfitting and model diverging.