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Maurizio Filippone

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Published work

19 published item(s)

preprint2026arXiv

Position: agentic AI orchestration should be Bayes-consistent

LLMs excel at predictive tasks and complex reasoning tasks, but many high-value deployments rely on decisions under uncertainty, for example, which tool to call, which expert to consult, or how many resources to invest. While the usefulness and feasibility of Bayesian approaches remain unclear for LLM inference, this position paper argues that the control layer of an agentic AI system (that orchestrates LLMs and tools) is a clear case where Bayesian principles should shine. Bayesian decision theory provides a framework for agentic systems that can help to maintain beliefs over task-relevant latent quantities, to update these beliefs from observed agentic and human-AI interactions, and to choose actions. Making LLMs themselves explicitly Bayesian belief-updating engines remains computationally intensive and conceptually nontrivial as a general modeling target. In contrast, this paper argues that coherent decision-making requires Bayesian principles at the orchestration level of the agentic system, not necessarily the LLM agent parameters. This paper articulates practical properties for Bayesian control that fit modern agentic AI systems and human-AI collaboration, and provides concrete examples and design patterns to illustrate how calibrated beliefs and utility-aware policies can improve agentic AI orchestration.

preprint2022arXiv

All You Need is a Good Functional Prior for Bayesian Deep Learning

The Bayesian treatment of neural networks dictates that a prior distribution is specified over their weight and bias parameters. This poses a challenge because modern neural networks are characterized by a large number of parameters, and the choice of these priors has an uncontrolled effect on the induced functional prior, which is the distribution of the functions obtained by sampling the parameters from their prior distribution. We argue that this is a hugely limiting aspect of Bayesian deep learning, and this work tackles this limitation in a practical and effective way. Our proposal is to reason in terms of functional priors, which are easier to elicit, and to "tune" the priors of neural network parameters in a way that they reflect such functional priors. Gaussian processes offer a rigorous framework to define prior distributions over functions, and we propose a novel and robust framework to match their prior with the functional prior of neural networks based on the minimization of their Wasserstein distance. We provide vast experimental evidence that coupling these priors with scalable Markov chain Monte Carlo sampling offers systematically large performance improvements over alternative choices of priors and state-of-the-art approximate Bayesian deep learning approaches. We consider this work a considerable step in the direction of making the long-standing challenge of carrying out a fully Bayesian treatment of neural networks, including convolutional neural networks, a concrete possibility.

preprint2022arXiv

Local Random Feature Approximations of the Gaussian Kernel

A fundamental drawback of kernel-based statistical models is their limited scalability to large data sets, which requires resorting to approximations. In this work, we focus on the popular Gaussian kernel and on techniques to linearize kernel-based models by means of random feature approximations. In particular, we do so by studying a less explored random feature approximation based on Maclaurin expansions and polynomial sketches. We show that such approaches yield poor results when modelling high-frequency data, and we propose a novel localization scheme that improves kernel approximations and downstream performance significantly in this regime. We demonstrate these gains on a number of experiments involving the application of Gaussian process regression to synthetic and real-world data of different data sizes and dimensions.

preprint2021arXiv

An Identifiable Double VAE For Disentangled Representations

A large part of the literature on learning disentangled representations focuses on variational autoencoders (VAE). Recent developments demonstrate that disentanglement cannot be obtained in a fully unsupervised setting without inductive biases on models and data. However, Khemakhem et al., AISTATS, 2020 suggest that employing a particular form of factorized prior, conditionally dependent on auxiliary variables complementing input observations, can be one such bias, resulting in an identifiable model with guarantees on disentanglement. Working along this line, we propose a novel VAE-based generative model with theoretical guarantees on identifiability. We obtain our conditional prior over the latents by learning an optimal representation, which imposes an additional strength on their regularization. We also extend our method to semi-supervised settings. Experimental results indicate superior performance with respect to state-of-the-art approaches, according to several established metrics proposed in the literature on disentanglement.

preprint2021arXiv

Sparse Gaussian Processes Revisited: Bayesian Approaches to Inducing-Variable Approximations

Variational inference techniques based on inducing variables provide an elegant framework for scalable posterior estimation in Gaussian process (GP) models. Besides enabling scalability, one of their main advantages over sparse approximations using direct marginal likelihood maximization is that they provide a robust alternative for point estimation of the inducing inputs, i.e. the location of the inducing variables. In this work we challenge the common wisdom that optimizing the inducing inputs in the variational framework yields optimal performance. We show that, by revisiting old model approximations such as the fully-independent training conditionals endowed with powerful sampling-based inference methods, treating both inducing locations and GP hyper-parameters in a Bayesian way can improve performance significantly. Based on stochastic gradient Hamiltonian Monte Carlo, we develop a fully Bayesian approach to scalable GP and deep GP models, and demonstrate its state-of-the-art performance through an extensive experimental campaign across several regression and classification problems.

preprint2021arXiv

Sparsification as a Remedy for Staleness in Distributed Asynchronous SGD

Large scale machine learning is increasingly relying on distributed optimization, whereby several machines contribute to the training process of a statistical model. In this work we study the performance of asynchronous, distributed settings, when applying sparsification, a technique used to reduce communication overheads. In particular, for the first time in an asynchronous, non-convex setting, we theoretically prove that, in presence of staleness, sparsification does not harm SGD performance: the ergodic convergence rate matches the known result of standard SGD, that is $\mathcal{O} \left( 1/\sqrt{T} \right)$. We also carry out an empirical study to complement our theory, and confirm that the effects of sparsification on the convergence rate are negligible, when compared to 'vanilla' SGD, even in the challenging scenario of an asynchronous, distributed system.

preprint2020arXiv

A Variational View on Bootstrap Ensembles as Bayesian Inference

In this paper, we employ variational arguments to establish a connection between ensemble methods for Neural Networks and Bayesian inference. We consider an ensemble-based scheme where each model/particle corresponds to a perturbation of the data by means of parametric bootstrap and a perturbation of the prior. We derive conditions under which any optimization steps of the particles makes the associated distribution reduce its divergence to the posterior over model parameters. Such conditions do not require any particular form for the approximation and they are purely geometrical, giving insights on the behavior of the ensemble on a number of interesting models such as Neural Networks with ReLU activations. Experiments confirm that ensemble methods can be a valid alternative to approximate Bayesian inference; the theoretical developments in the paper seek to explain this behavior.

preprint2020arXiv

Deep Compositional Spatial Models

Spatial processes with nonstationary and anisotropic covariance structure are often used when modelling, analysing and predicting complex environmental phenomena. Such processes may often be expressed as ones that have stationary and isotropic covariance structure on a warped spatial domain. However, the warping function is generally difficult to fit and not constrained to be injective, often resulting in `space-folding.' Here, we propose modelling an injective warping function through a composition of multiple elemental injective functions in a deep-learning framework. We consider two cases; first, when these functions are known up to some weights that need to be estimated, and, second, when the weights in each layer are random. Inspired by recent methodological and technological advances in deep learning and deep Gaussian processes, we employ approximate Bayesian methods to make inference with these models using graphics processing units. Through simulation studies in one and two dimensions we show that the deep compositional spatial models are quick to fit, and are able to provide better predictions and uncertainty quantification than other deep stochastic models of similar complexity. We also show their remarkable capacity to model nonstationary, anisotropic spatial data using radiances from the MODIS instrument aboard the Aqua satellite.

preprint2020arXiv

Isotropic SGD: a Practical Approach to Bayesian Posterior Sampling

In this work we define a unified mathematical framework to deepen our understanding of the role of stochastic gradient (SG) noise on the behavior of Markov chain Monte Carlo sampling (SGMCMC) algorithms. Our formulation unlocks the design of a novel, practical approach to posterior sampling, which makes the SG noise isotropic using a fixed learning rate that we determine analytically, and that requires weaker assumptions than existing algorithms. In contrast, the common traits of existing \sgmcmc algorithms is to approximate the isotropy condition either by drowning the gradients in additive noise (annealing the learning rate) or by making restrictive assumptions on the \sg noise covariance and the geometry of the loss landscape. Extensive experimental validations indicate that our proposal is competitive with the state-of-the-art on \sgmcmc, while being much more practical to use.

preprint2019arXiv

Kernel computations from large-scale random features obtained by Optical Processing Units

Approximating kernel functions with random features (RFs)has been a successful application of random projections for nonparametric estimation. However, performing random projections presents computational challenges for large-scale problems. Recently, a new optical hardware called Optical Processing Unit (OPU) has been developed for fast and energy-efficient computation of large-scale RFs in the analog domain. More specifically, the OPU performs the multiplication of input vectors by a large random matrix with complex-valued i.i.d. Gaussian entries, followed by the application of an element-wise squared absolute value operation - this last nonlinearity being intrinsic to the sensing process. In this paper, we show that this operation results in a dot-product kernel that has connections to the polynomial kernel, and we extend this computation to arbitrary powers of the feature map. Experiments demonstrate that the OPU kernel and its RF approximation achieve competitive performance in applications using kernel ridge regression and transfer learning for image classification. Crucially, thanks to the use of the OPU, these results are obtained with time and energy savings.

preprint2016arXiv

Adaptive Multiple Importance Sampling for Gaussian Processes

In applications of Gaussian processes where quantification of uncertainty is a strict requirement, it is necessary to accurately characterize the posterior distribution over Gaussian process covariance parameters. Normally, this is done by means of standard Markov chain Monte Carlo (MCMC) algorithms. Motivated by the issues related to the complexity of calculating the marginal likelihood that can make MCMC algorithms inefficient, this paper develops an alternative inference framework based on Adaptive Multiple Importance Sampling (AMIS). This paper studies the application of AMIS in the case of a Gaussian likelihood, and proposes the Pseudo-Marginal AMIS for non-Gaussian likelihoods, where the marginal likelihood is unbiasedly estimated. The results suggest that the proposed framework outperforms MCMC-based inference of covariance parameters in a wide range of scenarios and remains competitive for moderately large dimensional parameter spaces.

preprint2016arXiv

Mini-Batch Spectral Clustering

The cost of computing the spectrum of Laplacian matrices hinders the application of spectral clustering to large data sets. While approximations recover computational tractability, they can potentially affect clustering performance. This paper proposes a practical approach to learn spectral clustering based on adaptive stochastic gradient optimization. Crucially, the proposed approach recovers the exact spectrum of Laplacian matrices in the limit of the iterations, and the cost of each iteration is linear in the number of samples. Extensive experimental validation on data sets with up to half a million samples demonstrate its scalability and its ability to outperform state-of-the-art approximate methods to learn spectral clustering for a given computational budget.

preprint2016arXiv

Preconditioning Kernel Matrices

The computational and storage complexity of kernel machines presents the primary barrier to their scaling to large, modern, datasets. A common way to tackle the scalability issue is to use the conjugate gradient algorithm, which relieves the constraints on both storage (the kernel matrix need not be stored) and computation (both stochastic gradients and parallelization can be used). Even so, conjugate gradient is not without its own issues: the conditioning of kernel matrices is often such that conjugate gradients will have poor convergence in practice. Preconditioning is a common approach to alleviating this issue. Here we propose preconditioned conjugate gradients for kernel machines, and develop a broad range of preconditioners particularly useful for kernel matrices. We describe a scalable approach to both solving kernel machines and learning their hyperparameters. We show this approach is exact in the limit of iterations and outperforms state-of-the-art approximations for a given computational budget.

preprint2015arXiv

Bayesian nonparametric disclosure risk estimation via mixed effects log-linear models

Statistical agencies and other institutions collect data under the promise to protect the confidentiality of respondents. When releasing microdata samples, the risk that records can be identified must be assessed. To this aim, a widely adopted approach is to isolate categorical variables key to the identification and analyze multi-way contingency tables of such variables. Common disclosure risk measures focus on sample unique cells in these tables and adopt parametric log-linear models as the standard statistical tools for the problem. Such models often have to deal with large and extremely sparse tables that pose a number of challenges to risk estimation. This paper proposes to overcome these problems by studying nonparametric alternatives based on Dirichlet process random effects. The main finding is that the inclusion of such random effects allows us to reduce considerably the number of fixed effects required to achieve reliable risk estimates. This is studied on applications to real data, suggesting, in particular, that our mixed models with main effects only produce roughly equivalent estimates compared to the all two-way interactions models, and are effective in defusing potential shortcomings of traditional log-linear models. This paper adopts a fully Bayesian approach that accounts for all sources of uncertainty, including that about the population frequencies, and supplies unconditional (posterior) variances and credible intervals.

preprint2015arXiv

Enabling scalable stochastic gradient-based inference for Gaussian processes by employing the Unbiased LInear System SolvEr (ULISSE)

In applications of Gaussian processes where quantification of uncertainty is of primary interest, it is necessary to accurately characterize the posterior distribution over covariance parameters. This paper proposes an adaptation of the Stochastic Gradient Langevin Dynamics algorithm to draw samples from the posterior distribution over covariance parameters with negligible bias and without the need to compute the marginal likelihood. In Gaussian process regression, this has the enormous advantage that stochastic gradients can be computed by solving linear systems only. A novel unbiased linear systems solver based on parallelizable covariance matrix-vector products is developed to accelerate the unbiased estimation of gradients. The results demonstrate the possibility to enable scalable and exact (in a Monte Carlo sense) quantification of uncertainty in Gaussian processes without imposing any special structure on the covariance or reducing the number of input vectors.

preprint2015arXiv

MCMC for Variationally Sparse Gaussian Processes

Gaussian process (GP) models form a core part of probabilistic machine learning. Considerable research effort has been made into attacking three issues with GP models: how to compute efficiently when the number of data is large; how to approximate the posterior when the likelihood is not Gaussian and how to estimate covariance function parameter posteriors. This paper simultaneously addresses these, using a variational approximation to the posterior which is sparse in support of the function but otherwise free-form. The result is a Hybrid Monte-Carlo sampling scheme which allows for a non-Gaussian approximation over the function values and covariance parameters simultaneously, with efficient computations based on inducing-point sparse GPs. Code to replicate each experiment in this paper will be available shortly.

preprint2014arXiv

Bayesian Inference for Gaussian Process Classifiers with Annealing and Pseudo-Marginal MCMC

Kernel methods have revolutionized the fields of pattern recognition and machine learning. Their success, however, critically depends on the choice of kernel parameters. Using Gaussian process (GP) classification as a working example, this paper focuses on Bayesian inference of covariance (kernel) parameters using Markov chain Monte Carlo (MCMC) methods. The motivation is that, compared to standard optimization of kernel parameters, they have been systematically demonstrated to be superior in quantifying uncertainty in predictions. Recently, the Pseudo-Marginal MCMC approach has been proposed as a practical inference tool for GP models. In particular, it amounts in replacing the analytically intractable marginal likelihood by an unbiased estimate obtainable by approximate methods and importance sampling. After discussing the potential drawbacks in employing importance sampling, this paper proposes the application of annealed importance sampling. The results empirically demonstrate that compared to importance sampling, annealed importance sampling can reduce the variance of the estimate of the marginal likelihood exponentially in the number of data at a computational cost that scales only polynomially. The results on real data demonstrate that employing annealed importance sampling in the Pseudo-Marginal MCMC approach represents a step forward in the development of fully automated exact inference engines for GP models.

preprint2014arXiv

On User Availability Prediction and Network Applications

User connectivity patterns in network applications are known to be heterogeneous, and to follow periodic (daily and weekly) patterns. In many cases, the regularity and the correlation of those patterns is problematic: for network applications, many connected users create peaks of demand; in contrast, in peer-to-peer scenarios, having few users online results in a scarcity of available resources. On the other hand, since connectivity patterns exhibit a periodic behavior, they are to some extent predictable. This work shows how this can be exploited to anticipate future user connectivity and to have applications proactively responding to it. We evaluate the probability that any given user will be online at any given time, and assess the prediction on six-month availability traces from three different Internet applications. Building upon this, we show how our probabilistic approach makes it easy to evaluate and optimize the performance in a number of diverse network application models, and to use them to optimize systems. In particular, we show how this approach can be used in distributed hash tables, friend-to-friend storage, and cache pre-loading for social networks, resulting in substantial gains in data availability and system efficiency at negligible costs.

preprint2014arXiv

Pseudo-Marginal Bayesian Inference for Gaussian Processes

The main challenges that arise when adopting Gaussian Process priors in probabilistic modeling are how to carry out exact Bayesian inference and how to account for uncertainty on model parameters when making model-based predictions on out-of-sample data. Using probit regression as an illustrative working example, this paper presents a general and effective methodology based on the pseudo-marginal approach to Markov chain Monte Carlo that efficiently addresses both of these issues. The results presented in this paper show improvements over existing sampling methods to simulate from the posterior distribution over the parameters defining the covariance function of the Gaussian Process prior. This is particularly important as it offers a powerful tool to carry out full Bayesian inference of Gaussian Process based hierarchic statistical models in general. The results also demonstrate that Monte Carlo based integration of all model parameters is actually feasible in this class of models providing a superior quantification of uncertainty in predictions. Extensive comparisons with respect to state-of-the-art probabilistic classifiers confirm this assertion.