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Luping Zhou

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Published work

16 published item(s)

preprint2026arXiv

Semi-MedRef: Semi-Supervised Medical Referring Image Segmentation with Cross-Modal Alignment

Medical referring image segmentation (MRIS) requires pixel-level masks aligned with textual descriptions of anatomical locations, making annotation costly in low-label regimes. Semi-supervised learning (SSL) can mitigate this burden by leveraging unlabeled data, but its success hinges on maintaining reliable image-text alignment under perturbations. Most existing SSL-based referred segmentation methods use either independent or simplistic multi-modal perturbations (e.g., left-right flips), without fully addressing cross-modal alignment under strong augmentation, while CutMix, highly effective in single-modal SSL, remains underexplored in multi-modal settings due to its tendency to disrupt image-text coherence. We propose Semi-MedRef, a teacher-student SSL framework designed to explicitly maintain consistency between medical images and positional language through three alignment-preserving components: T-PatchMix, a cross-modal CutMix-style augmentation that synchronizes patch mixing with referring expressions via position-constrained and probability-driven rules; PosAug, a position-aware text augmentation that masks or fuzzes anatomical phrases; and ITCL, a position-guided image-text contrastive learning module, which leverages positional pseudo-labels to construct soft anatomical positives and strengthen medically grounded cross-modal alignment. Experiments on QaTa-COV19 and MosMedData+ demonstrate that Semi-MedRef consistently outperforms both fully supervised and semi-supervised baselines across all label regimes.

preprint2022arXiv

A Medical Semantic-Assisted Transformer for Radiographic Report Generation

Automated radiographic report generation is a challenging cross-domain task that aims to automatically generate accurate and semantic-coherence reports to describe medical images. Despite the recent progress in this field, there are still many challenges at least in the following aspects. First, radiographic images are very similar to each other, and thus it is difficult to capture the fine-grained visual differences using CNN as the visual feature extractor like many existing methods. Further, semantic information has been widely applied to boost the performance of generation tasks (e.g. image captioning), but existing methods often fail to provide effective medical semantic features. Toward solving those problems, in this paper, we propose a memory-augmented sparse attention block utilizing bilinear pooling to capture the higher-order interactions between the input fine-grained image features while producing sparse attention. Moreover, we introduce a novel Medical Concepts Generation Network (MCGN) to predict fine-grained semantic concepts and incorporate them into the report generation process as guidance. Our proposed method shows promising performance on the recently released largest benchmark MIMIC-CXR. It outperforms multiple state-of-the-art methods in image captioning and medical report generation.

preprint2022arXiv

Instance Image Retrieval by Learning Purely From Within the Dataset

Quality feature representation is key to instance image retrieval. To attain it, existing methods usually resort to a deep model pre-trained on benchmark datasets or even fine-tune the model with a task-dependent labelled auxiliary dataset. Although achieving promising results, this approach is restricted by two issues: 1) the domain gap between benchmark datasets and the dataset of a given retrieval task; 2) the required auxiliary dataset cannot be readily obtained. In light of this situation, this work looks into a different approach which has not been well investigated for instance image retrieval previously: {can we learn feature representation \textit{specific to} a given retrieval task in order to achieve excellent retrieval?} Our finding is encouraging. By adding an object proposal generator to generate image regions for self-supervised learning, the investigated approach can successfully learn feature representation specific to a given dataset for retrieval. This representation can be made even more effective by boosting it with image similarity information mined from the dataset. As experimentally validated, such a simple ``self-supervised learning + self-boosting'' approach can well compete with the relevant state-of-the-art retrieval methods. Ablation study is conducted to show the appealing properties of this approach and its limitation on generalisation across datasets.

preprint2022arXiv

Inverse design of nano-photonic wavelength demultiplexer with a deep neural network approach

In this paper, we propose a pre-trained-combined neural network (PTCN) as a comprehensive solution to the inverse design of an integrated photonic circuit. By utilizing both the initially pre-trained inverse and forward model with a joint training process, our PTCN model shows remarkable tolerance to the quantity and quality of the training data. As a proof of concept demonstration, the inverse design of a wavelength demultiplexer is used to verify the effectiveness of the PTCN model. The correlation coefficient of the prediction by the presented PTCN model remains greater than 0.974 even when the size of training data is decreased to 17%. The experimental results show a good agreement with predictions, and demonstrate a wavelength demultiplexer with an ultra-compact footprint, a high transmission efficiency with a transmission loss of -2dB, a low reflection of -10dB, and low crosstalk around -7dB simultaneously.

preprint2021arXiv

Crosslink-Net: Double-branch Encoder Segmentation Network via Fusing Vertical and Horizontal Convolutions

Accurate image segmentation plays a crucial role in medical image analysis, yet it faces great challenges of various shapes, diverse sizes, and blurry boundaries. To address these difficulties, square kernel-based encoder-decoder architecture has been proposed and widely used, but its performance remains still unsatisfactory. To further cope with these challenges, we present a novel double-branch encoder architecture. Our architecture is inspired by two observations: 1) Since the discrimination of features learned via square convolutional kernels needs to be further improved, we propose to utilize non-square vertical and horizontal convolutional kernels in the double-branch encoder, so features learned by the two branches can be expected to complement each other. 2) Considering that spatial attention can help models to better focus on the target region in a large-sized image, we develop an attention loss to further emphasize the segmentation on small-sized targets. Together, the above two schemes give rise to a novel double-branch encoder segmentation framework for medical image segmentation, namely Crosslink-Net. The experiments validate the effectiveness of our model on four datasets. The code is released at https://github.com/Qianyu1226/Crosslink-Net.

preprint2020arXiv

ASMFS: Adaptive-Similarity-based Multi-modality Feature Selection for Classification of Alzheimer's Disease

With the increasing amounts of high-dimensional heterogeneous data to be processed, multi-modality feature selection has become an important research direction in medical image analysis. Traditional methods usually depict the data structure using fixed and predefined similarity matrix for each modality separately, without considering the potential relationship structure across different modalities. In this paper, we propose a novel multi-modality feature selection method, which performs feature selection and local similarity learning simultaniously. Specially, a similarity matrix is learned by jointly considering different imaging modalities. And at the same time, feature selection is conducted by imposing sparse l_{2, 1} norm constraint. The effectiveness of our proposed joint learning method can be well demonstrated by the experimental results on Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset, which outperforms existing the state-of-the-art multi-modality approaches.

preprint2020arXiv

Class Distribution Alignment for Adversarial Domain Adaptation

Most existing unsupervised domain adaptation methods mainly focused on aligning the marginal distributions of samples between the source and target domains. This setting does not sufficiently consider the class distribution information between the two domains, which could adversely affect the reduction of domain gap. To address this issue, we propose a novel approach called Conditional ADversarial Image Translation (CADIT) to explicitly align the class distributions given samples between the two domains. It integrates a discriminative structure-preserving loss and a joint adversarial generation loss. The former effectively prevents undesired label-flipping during the whole process of image translation, while the latter maintains the joint distribution alignment of images and labels. Furthermore, our approach enforces the classification consistence of target domain images before and after adaptation to aid the classifier training in both domains. Extensive experiments were conducted on multiple benchmark datasets including Digits, Faces, Scenes and Office31, showing that our approach achieved superior classification in the target domain when compared to the state-of-the-art methods. Also, both qualitative and quantitative results well supported our motivation that aligning the class distributions can indeed improve domain adaptation.

preprint2020arXiv

Deep Learning based HEp-2 Image Classification: A Comprehensive Review

Classification of HEp-2 cell patterns plays a significant role in the indirect immunofluorescence test for identifying autoimmune diseases in the human body. Many automatic HEp-2 cell classification methods have been proposed in recent years, amongst which deep learning based methods have shown impressive performance. This paper provides a comprehensive review of the existing deep learning based HEp-2 cell image classification methods. These methods perform HEp-2 image classification at two levels, namely, cell-level and specimen-level. Both levels are covered in this review. At each level, the methods are organized with a deep network usage based taxonomy. The core idea, notable achievements, and key strengths and weaknesses of each method are critically analyzed. Furthermore, a concise review of the existing HEp-2 datasets that are commonly used in the literature is given. The paper ends with a discussion on novel opportunities and future research directions in this field. It is hoped that this paper would provide readers with a thorough reference of this novel, challenging, and thriving field.

preprint2020arXiv

Epileptic Seizure Classification with Symmetric and Hybrid Bilinear Models

Epilepsy affects nearly 1% of the global population, of which two thirds can be treated by anti-epileptic drugs and a much lower percentage by surgery. Diagnostic procedures for epilepsy and monitoring are highly specialized and labour-intensive. The accuracy of the diagnosis is also complicated by overlapping medical symptoms, varying levels of experience and inter-observer variability among clinical professions. This paper proposes a novel hybrid bilinear deep learning network with an application in the clinical procedures of epilepsy classification diagnosis, where the use of surface electroencephalogram (sEEG) and audiovisual monitoring is standard practice. Hybrid bilinear models based on two types of feature extractors, namely Convolutional Neural Networks (CNNs) and Recurrent Neural Networks (RNNs), are trained using Short-Time Fourier Transform (STFT) of one-second sEEG. In the proposed hybrid models, CNNs extract spatio-temporal patterns, while RNNs focus on the characteristics of temporal dynamics in relatively longer intervals given the same input data. Second-order features, based on interactions between these spatio-temporal features are further explored by bilinear pooling and used for epilepsy classification. Our proposed methods obtain an F1-score of 97.4% on the Temple University Hospital Seizure Corpus and 97.2% on the EPILEPSIAE dataset, comparing favourably to existing benchmarks for sEEG-based seizure type classification. The open-source implementation of this study is available at https://github.com/NeuroSyd/Epileptic-Seizure-Classification

preprint2019arXiv

Measurements of differential and angle-integrated cross sections for the $^{10}$B($n, α$)$^{7}$Li reaction in the neutron energy range from 1.0 eV to 2.5 MeV

Differential and angle-integrated cross sections for the $^{10}$B($n, α$)$^{7}$Li, $^{10}$B($n, α$$_{0}$)$^{7}$Li and $^{10}$B($n, α$$_{1}$)$^{7}$Li$^{*}$ reactions have been measured at CSNS Back-n white neutron source. Two enriched (90%) $^{10}$B samples 5.0 cm in diameter and ~85.0 $μ$g/cm$^{2}$ in thickness each with an aluminum backing were prepared, and back-to-back mounted at the sample holder. The charged particles were detected using the silicon-detector array of the Light-charged Particle Detector Array (LPDA) system. The neutron energy E$_{n}$ was determined by TOF (time-of-flight) method, and the valid $α$ events were extracted from the E$_{n}$-Amplitude two-dimensional spectrum. With 15 silicon detectors, the differential cross sections of $α$-particles were measured from 19.2° to 160.8°. Fitted with the Legendre polynomial series, the ($n, α$) cross sections were obtained through integration. The absolute cross sections were normalized using the standard cross sections of the $^{10}$B($n, α$)$^{7}$Li reaction in the 0.3 - 0.5 MeV neutron energy region. The measurement neutron energy range for the $^{10}$B($n, α$)$^{7}$Li reaction is 1.0 eV $\le$ En < 2.5 MeV (67 energy points), and for the $^{10}$B($n, α$$_{0}$)$^{7}$Li and $^{10}$B($n, α$$_{1}$)$^{7}$Li$^{*}$ reactions is 1.0 eV $\le$ En < 1.0 MeV (59 energy points). The present results have been analyzed by the resonance reaction mechanism and the level structure of the $^{11}$B compound system, and compared with existing measurements and evaluations.

preprint2016arXiv

Exploiting Structure Sparsity for Covariance-based Visual Representation

The past few years have witnessed increasing research interest on covariance-based feature representation. A variety of methods have been proposed to boost its efficacy, with some recent ones resorting to nonlinear kernel technique. Noting that the essence of this feature representation is to characterise the underlying structure of visual features, this paper argues that an equally, if not more, important approach to boosting its efficacy shall be to improve the quality of this characterisation. Following this idea, we propose to exploit the structure sparsity of visual features in skeletal human action recognition, and compute sparse inverse covariance estimate (SICE) as feature representation. We discuss the advantage of this new representation on dealing with small sample, high dimensionality, and modelling capability. Furthermore, utilising the monotonicity property of SICE, we efficiently generate a hierarchy of SICE matrices to characterise the structure of visual features at different sparsity levels, and two discriminative learning algorithms are then developed to adaptively integrate them to perform recognition. As demonstrated by extensive experiments, the proposed representation leads to significantly improved recognition performance over the state-of-the-art comparable methods. In particular, as a method fully based on linear technique, it is comparable or even better than those employing nonlinear kernel technique. This result well demonstrates the value of exploiting structure sparsity for covariance-based feature representation.

preprint2016arXiv

OPML: A One-Pass Closed-Form Solution for Online Metric Learning

To achieve a low computational cost when performing online metric learning for large-scale data, we present a one-pass closed-form solution namely OPML in this paper. Typically, the proposed OPML first adopts a one-pass triplet construction strategy, which aims to use only a very small number of triplets to approximate the representation ability of whole original triplets obtained by batch-manner methods. Then, OPML employs a closed-form solution to update the metric for new coming samples, which leads to a low space (i.e., $O(d)$) and time (i.e., $O(d^2)$) complexity, where $d$ is the feature dimensionality. In addition, an extension of OPML (namely COPML) is further proposed to enhance the robustness when in real case the first several samples come from the same class (i.e., cold start problem). In the experiments, we have systematically evaluated our methods (OPML and COPML) on three typical tasks, including UCI data classification, face verification, and abnormal event detection in videos, which aims to fully evaluate the proposed methods on different sample number, different feature dimensionalities and different feature extraction ways (i.e., hand-crafted and deeply-learned). The results show that OPML and COPML can obtain the promising performance with a very low computational cost. Also, the effectiveness of COPML under the cold start setting is experimentally verified.

preprint2015arXiv

HEp-2 Cell Image Classification with Deep Convolutional Neural Networks

Efficient Human Epithelial-2 (HEp-2) cell image classification can facilitate the diagnosis of many autoimmune diseases. This paper presents an automatic framework for this classification task, by utilizing the deep convolutional neural networks (CNNs) which have recently attracted intensive attention in visual recognition. This paper elaborates the important components of this framework, discusses multiple key factors that impact the efficiency of training a deep CNN, and systematically compares this framework with the well-established image classification models in the literature. Experiments on benchmark datasets show that i) the proposed framework can effectively outperform existing models by properly applying data augmentation; ii) our CNN-based framework demonstrates excellent adaptability across different datasets, which is highly desirable for classification under varying laboratory settings. Our system is ranked high in the cell image classification competition hosted by ICPR 2014.

preprint2015arXiv

Learning Discriminative Bayesian Networks from High-dimensional Continuous Neuroimaging Data

Due to its causal semantics, Bayesian networks (BN) have been widely employed to discover the underlying data relationship in exploratory studies, such as brain research. Despite its success in modeling the probability distribution of variables, BN is naturally a generative model, which is not necessarily discriminative. This may cause the ignorance of subtle but critical network changes that are of investigation values across populations. In this paper, we propose to improve the discriminative power of BN models for continuous variables from two different perspectives. This brings two general discriminative learning frameworks for Gaussian Bayesian networks (GBN). In the first framework, we employ Fisher kernel to bridge the generative models of GBN and the discriminative classifiers of SVMs, and convert the GBN parameter learning to Fisher kernel learning via minimizing a generalization error bound of SVMs. In the second framework, we employ the max-margin criterion and build it directly upon GBN models to explicitly optimize the classification performance of the GBNs. The advantages and disadvantages of the two frameworks are discussed and experimentally compared. Both of them demonstrate strong power in learning discriminative parameters of GBNs for neuroimaging based brain network analysis, as well as maintaining reasonable representation capacity. The contributions of this paper also include a new Directed Acyclic Graph (DAG) constraint with theoretical guarantee to ensure the graph validity of GBN.

preprint2015arXiv

Learning Discriminative Stein Kernel for SPD Matrices and Its Applications

Stein kernel has recently shown promising performance on classifying images represented by symmetric positive definite (SPD) matrices. It evaluates the similarity between two SPD matrices through their eigenvalues. In this paper, we argue that directly using the original eigenvalues may be problematic because: i) Eigenvalue estimation becomes biased when the number of samples is inadequate, which may lead to unreliable kernel evaluation; ii) More importantly, eigenvalues only reflect the property of an individual SPD matrix. They are not necessarily optimal for computing Stein kernel when the goal is to discriminate different sets of SPD matrices. To address the two issues in one shot, we propose a discriminative Stein kernel, in which an extra parameter vector is defined to adjust the eigenvalues of the input SPD matrices. The optimal parameter values are sought by optimizing a proxy of classification performance. To show the generality of the proposed method, three different kernel learning criteria that are commonly used in the literature are employed respectively as a proxy. A comprehensive experimental study is conducted on a variety of image classification tasks to compare our proposed discriminative Stein kernel with the original Stein kernel and other commonly used methods for evaluating the similarity between SPD matrices. The experimental results demonstrate that, the discriminative Stein kernel can attain greater discrimination and better align with classification tasks by altering the eigenvalues. This makes it produce higher classification performance than the original Stein kernel and other commonly used methods.

preprint2013arXiv

Multiple Kernel Learning in the Primal for Multi-modal Alzheimer's Disease Classification

To achieve effective and efficient detection of Alzheimer's disease (AD), many machine learning methods have been introduced into this realm. However, the general case of limited training samples, as well as different feature representations typically makes this problem challenging. In this work, we propose a novel multiple kernel learning framework to combine multi-modal features for AD classification, which is scalable and easy to implement. Contrary to the usual way of solving the problem in the dual space, we look at the optimization from a new perspective. By conducting Fourier transform on the Gaussian kernel, we explicitly compute the mapping function, which leads to a more straightforward solution of the problem in the primal space. Furthermore, we impose the mixed $L_{21}$ norm constraint on the kernel weights, known as the group lasso regularization, to enforce group sparsity among different feature modalities. This actually acts as a role of feature modality selection, while at the same time exploiting complementary information among different kernels. Therefore it is able to extract the most discriminative features for classification. Experiments on the ADNI data set demonstrate the effectiveness of the proposed method.