Researcher profile

Ellen Gilsenan-McMahon

Ellen Gilsenan-McMahon contributes to research discovery and scholarly infrastructure.

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Published work

3 published item(s)

preprint2026arXiv

Beyond the Baseband: Adaptive Multi-Band Encoding for Full-Spectrum Bioacoustics Classification

Animals hear and vocalize across frequency ranges that differ substantially from humans, often extending into the ultrasonic domain. Yet most computational bioacoustics systems rely on audio models pre-trained at 16 kHz, restricting their usable bandwidth to the 0-8 kHz baseband and discarding higher-frequency information present in many bioacoustic recordings. We investigate a multi-band encoding framework that decomposes the full spectrum of animal calls into band features and fuses them into a unified representation. Similarity analyses on models show that certain encoders produce decorrelated band embeddings that improve class separation after fusion. Classification experiments on three bioacoustic datasets using eight pre-trained models and five fusion strategies show that fused representations consistently outperform the baseband and time-expansion baselines on two datasets, showing the potential of multi-band methods for full-spectrum encoding of animal calls.

preprint2026arXiv

Multi-layer attentive probing improves transfer of audio representations for bioacoustics

Probing heads map the representations learned from audio by a machine learning model to downstream task labels and are a key component in evaluating representation learning. Most bioacoustic benchmarks use a fixed, low-capacity probe, such as a linear layer on the final encoder layer. While this standardization enables model comparisons, it may bias results by overlooking the interaction between encoder features and probe design. In this work, we systematically study different probing strategies across two bioacoustic benchmarks, BEANs and BirdSet. We evaluate last- and multi-layer probing, across linear and attention probes. We show that larger probe heads that leverage time information have superior performance. Our results suggest that current benchmarks may misrepresent encoder quality when relying on a last-layer probing setup. Multi-layer probing improves downstream task performance across all tested models, while attention probing has superior performance to linear probing for transformer models.

preprint2022arXiv

StreamingQA: A Benchmark for Adaptation to New Knowledge over Time in Question Answering Models

Knowledge and language understanding of models evaluated through question answering (QA) has been usually studied on static snapshots of knowledge, like Wikipedia. However, our world is dynamic, evolves over time, and our models' knowledge becomes outdated. To study how semi-parametric QA models and their underlying parametric language models (LMs) adapt to evolving knowledge, we construct a new large-scale dataset, StreamingQA, with human written and generated questions asked on a given date, to be answered from 14 years of time-stamped news articles. We evaluate our models quarterly as they read new articles not seen in pre-training. We show that parametric models can be updated without full retraining, while avoiding catastrophic forgetting. For semi-parametric models, adding new articles into the search space allows for rapid adaptation, however, models with an outdated underlying LM under-perform those with a retrained LM. For questions about higher-frequency named entities, parametric updates are particularly beneficial. In our dynamic world, the StreamingQA dataset enables a more realistic evaluation of QA models, and our experiments highlight several promising directions for future research.