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Elena De Momi

Elena De Momi contributes to research discovery and scholarly infrastructure.

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Published work

14 published item(s)

preprint2026arXiv

Predicting Response to Neoadjuvant Chemotherapy in Ovarian Cancer from CT Baseline Using Multi-Loss Deep Learning

Ovarian cancer is the most lethal gynecologic malignancy: around 60% of patients are diagnosed at an advanced stage, with an associated 5-year survival rate of about 30%. Early identification of non-responders to neoadjuvant chemotherapy remains a key unmet need, as it could prevent ineffective therapy and avoid delays in optimal surgical management. This work proposes a non-invasive deep learning framework to predict neoadjuvant chemotherapy response from pre-treatment contrast-enhanced CT by leveraging automatically derived 3D lesion masks. The approach encodes axial slices with a partially fine-tuned pretrained image encoder and aggregates slice-level representations into a volumetric embedding through an attention-based module. Training combines classification loss with supervised contrastive regularization and hard-negative mining to improve separation between ambiguous responders and non-responders. The method was developed on a retrospective single-center cohort from the European Institute of Oncology (Milan, IT), including 280 eligible patients (147 responder, 133 non-responder). On the test cohort, the model achieved a ROC-AUC of 0.73 (95% CI: 0.58-0.86) and an F1-score of 0.70 (95% CI: 0.56-0.82). Overall, these results suggest that the proposed architecture learns clinically relevant predictive patterns and provides a robust foundation for an imaging-based stratification tool.

preprint2023arXiv

An Integrated Dynamic Method for Allocating Roles and Planning Tasks for Mixed Human-Robot Teams

This paper proposes a novel integrated dynamic method based on Behavior Trees for planning and allocating tasks in mixed human robot teams, suitable for manufacturing environments. The Behavior Tree formulation allows encoding a single job as a compound of different tasks with temporal and logic constraints. In this way, instead of the well-studied offline centralized optimization problem, the role allocation problem is solved with multiple simplified online optimization sub-problem, without complex and cross-schedule task dependencies. These sub-problems are defined as Mixed-Integer Linear Programs, that, according to the worker-actions related costs and the workers' availability, allocate the yet-to-execute tasks among the available workers. To characterize the behavior of the developed method, we opted to perform different simulation experiments in which the results of the action-worker allocation and computational complexity are evaluated. The obtained results, due to the nature of the algorithm and to the possibility of simulating the agents' behavior, should describe well also how the algorithm performs in real experiments.

preprint2022arXiv

A Hybrid Learning and Optimization Framework to Achieve Physically Interactive Tasks with Mobile Manipulators

This paper proposes a hybrid learning and optimization framework for mobile manipulators for complex and physically interactive tasks. The framework exploits an admittance-type physical interface to obtain intuitive and simplified human demonstrations and Gaussian Mixture Model (GMM)/Gaussian Mixture Regression (GMR) to encode and generate the learned task requirements in terms of position, velocity, and force profiles. Next, using the desired trajectories and force profiles generated by GMM/GMR, the impedance parameters of a Cartesian impedance controller are optimized online through a Quadratic Program augmented with an energy tank to ensure the passivity of the controlled system. Two experiments are conducted to validate the framework, comparing our method with two approaches with constant stiffness (high and low). The results showed that the proposed method outperforms the other two cases in terms of trajectory tracking and generated interaction forces, even in the presence of disturbances such as unexpected end-effector collisions.

preprint2022arXiv

Autonomous Intraluminal Navigation of a Soft Robot using Deep-Learning-based Visual Servoing

Navigation inside luminal organs is an arduous task that requires non-intuitive coordination between the movement of the operator's hand and the information obtained from the endoscopic video. The development of tools to automate certain tasks could alleviate the physical and mental load of doctors during interventions, allowing them to focus on diagnosis and decision-making tasks. In this paper, we present a synergic solution for intraluminal navigation consisting of a 3D printed endoscopic soft robot that can move safely inside luminal structures. Visual servoing, based on Convolutional Neural Networks (CNNs) is used to achieve the autonomous navigation task. The CNN is trained with phantoms and in-vivo data to segment the lumen, and a model-less approach is presented to control the movement in constrained environments. The proposed robot is validated in anatomical phantoms in different path configurations. We analyze the movement of the robot using different metrics such as task completion time, smoothness, error in the steady-state, and mean and maximum error. We show that our method is suitable to navigate safely in hollow environments and conditions which are different than the ones the network was originally trained on.

preprint2022arXiv

FUN-SIS: a Fully UNsupervised approach for Surgical Instrument Segmentation

Automatic surgical instrument segmentation of endoscopic images is a crucial building block of many computer-assistance applications for minimally invasive surgery. So far, state-of-the-art approaches completely rely on the availability of a ground-truth supervision signal, obtained via manual annotation, thus expensive to collect at large scale. In this paper, we present FUN-SIS, a Fully-UNsupervised approach for binary Surgical Instrument Segmentation. FUN-SIS trains a per-frame segmentation model on completely unlabelled endoscopic videos, by solely relying on implicit motion information and instrument shape-priors. We define shape-priors as realistic segmentation masks of the instruments, not necessarily coming from the same dataset/domain as the videos. The shape-priors can be collected in various and convenient ways, such as recycling existing annotations from other datasets. We leverage them as part of a novel generative-adversarial approach, allowing to perform unsupervised instrument segmentation of optical-flow images during training. We then use the obtained instrument masks as pseudo-labels in order to train a per-frame segmentation model; to this aim, we develop a learning-from-noisy-labels architecture, designed to extract a clean supervision signal from these pseudo-labels, leveraging their peculiar noise properties. We validate the proposed contributions on three surgical datasets, including the MICCAI 2017 EndoVis Robotic Instrument Segmentation Challenge dataset. The obtained fully-unsupervised results for surgical instrument segmentation are almost on par with the ones of fully-supervised state-of-the-art approaches. This suggests the tremendous potential of the proposed method to leverage the great amount of unlabelled data produced in the context of minimally invasive surgery.

preprint2022arXiv

Learning Cooperative Dynamic Manipulation Skills from Human Demonstration Videos

This article proposes a method for learning and robotic replication of dynamic collaborative tasks from offline videos. The objective is to extend the concept of learning from demonstration (LfD) to dynamic scenarios, benefiting from widely available or easily producible offline videos. To achieve this goal, we decode important dynamic information, such as the Configuration Dependent Stiffness (CDS), which reveals the contribution of arm pose to the arm endpoint stiffness, from a three-dimensional human skeleton model. Next, through encoding of the CDS via Gaussian Mixture Model (GMM) and decoding via Gaussian Mixture Regression (GMR), the robot's Cartesian impedance profile is estimated and replicated. We demonstrate the proposed method in a collaborative sawing task with leader-follower structure, considering environmental constraints and dynamic uncertainties. The experimental setup includes two Panda robots, which replicate the leader-follower roles and the impedance profiles extracted from a two-persons sawing video.

preprint2022arXiv

Learning-Based Keypoint Registration for Fetoscopic Mosaicking

In Twin-to-Twin Transfusion Syndrome (TTTS), abnormal vascular anastomoses in the monochorionic placenta can produce uneven blood flow between the two fetuses. In the current practice, TTTS is treated surgically by closing abnormal anastomoses using laser ablation. This surgery is minimally invasive and relies on fetoscopy. Limited field of view makes anastomosis identification a challenging task for the surgeon. To tackle this challenge, we propose a learning-based framework for in-vivo fetoscopy frame registration for field-of-view expansion. The novelties of this framework relies on a learning-based keypoint proposal network and an encoding strategy to filter (i) irrelevant keypoints based on fetoscopic image segmentation and (ii) inconsistent homographies. We validate of our framework on a dataset of 6 intraoperative sequences from 6 TTTS surgeries from 6 different women against the most recent state of the art algorithm, which relies on the segmentation of placenta vessels. The proposed framework achieves higher performance compared to the state of the art, paving the way for robust mosaicking to provide surgeons with context awareness during TTTS surgery.

preprint2022arXiv

Pick the Right Co-Worker: Online Assessment of Cognitive Ergonomics in Human-Robot Collaborative Assembly

Human-robot collaborative assembly systems enhance the efficiency and productivity of the workplace but may increase the workers' cognitive demand. This paper proposes an online and quantitative framework to assess the cognitive workload induced by the interaction with a co-worker, either a human operator or an industrial collaborative robot with different control strategies. The approach monitors the operator's attention distribution and upper-body kinematics benefiting from the input images of a low-cost stereo camera and cutting-edge artificial intelligence algorithms (i.e. head pose estimation and skeleton tracking). Three experimental scenarios with variations in workstation features and interaction modalities were designed to test the performance of our online method against state-of-the-art offline measurements. Results proved that our vision-based cognitive load assessment has the potential to be integrated into the new generation of collaborative robotic technologies. The latter would enable human cognitive state monitoring and robot control strategy adaptation for improving human comfort, ergonomics, and trust in automation.

preprint2022arXiv

Robot Trajectory Adaptation to Optimise the Trade-off between Human Cognitive Ergonomics and Workplace Productivity in Collaborative Tasks

In hybrid industrial environments, workers' comfort and positive perception of safety are essential requirements for successful acceptance and usage of collaborative robots. This paper proposes a novel human-robot interaction framework in which the robot behaviour is adapted online according to the operator's cognitive workload and stress. The method exploits the generation of B-spline trajectories in the joint space and formulation of a multi-objective optimisation problem to online adjust the total execution time and smoothness of the robot trajectories. The former ensures human efficiency and productivity of the workplace, while the latter contributes to safeguarding the user's comfort and cognitive ergonomics. The performance of the proposed framework was evaluated in a typical industrial task. Results demonstrated its capability to enhance the productivity of the human-robot dyad while mitigating the cognitive workload induced in the worker.

preprint2022arXiv

Sociable and Ergonomic Human-Robot Collaboration through Action Recognition and Augmented Hierarchical Quadratic Programming

The recognition of actions performed by humans and the anticipation of their intentions are important enablers to yield sociable and successful collaboration in human-robot teams. Meanwhile, robots should have the capacity to deal with multiple objectives and constraints, arising from the collaborative task or the human. In this regard, we propose vision techniques to perform human action recognition and image classification, which are integrated into an Augmented Hierarchical Quadratic Programming (AHQP) scheme to hierarchically optimize the robot's reactive behavior and human ergonomics. The proposed framework allows one to intuitively command the robot in space while a task is being executed. The experiments confirm increased human ergonomics and usability, which are fundamental parameters for reducing musculoskeletal diseases and increasing trust in automation.

preprint2021arXiv

A Kinematic Bottleneck Approach For Pose Regression of Flexible Surgical Instruments directly from Images

3-D pose estimation of instruments is a crucial step towards automatic scene understanding in robotic minimally invasive surgery. Although robotic systems can potentially directly provide joint values, this information is not commonly exploited inside the operating room, due to its possible unreliability, limited access and the time-consuming calibration required, especially for continuum robots. For this reason, standard approaches for 3-D pose estimation involve the use of external tracking systems. Recently, image-based methods have emerged as promising, non-invasive alternatives. While many image-based approaches in the literature have shown accurate results, they generally require either a complex iterative optimization for each processed image, making them unsuitable for real-time applications, or a large number of manually-annotated images for efficient learning. In this paper we propose a self-supervised image-based method, exploiting, at training time only, the imprecise kinematic information provided by the robot. In order to avoid introducing time-consuming manual annotations, the problem is formulated as an auto-encoder, smartly bottlenecked by the presence of a physical model of the robotic instruments and surgical camera, forcing a separation between image background and kinematic content. Validation of the method was performed on semi-synthetic, phantom and in-vivo datasets, obtained using a flexible robotized endoscope, showing promising results for real-time image-based 3-D pose estimation of surgical instruments.

preprint2021arXiv

A Lumen Segmentation Method in Ureteroscopy Images based on a Deep Residual U-Net architecture

Ureteroscopy is becoming the first surgical treatment option for the majority of urinary affections. This procedure is performed using an endoscope which provides the surgeon with the visual information necessary to navigate inside the urinary tract. Having in mind the development of surgical assistance systems, that could enhance the performance of surgeon, the task of lumen segmentation is a fundamental part since this is the visual reference which marks the path that the endoscope should follow. This is something that has not been analyzed in ureteroscopy data before. However, this task presents several challenges given the image quality and the conditions itself of ureteroscopy procedures. In this paper, we study the implementation of a Deep Neural Network which exploits the advantage of residual units in an architecture based on U-Net. For the training of these networks, we analyze the use of two different color spaces: gray-scale and RGB data images. We found that training on gray-scale images gives the best results obtaining mean values of Dice Score, Precision, and Recall of 0.73, 0.58, and 0.92 respectively. The results obtained shows that the use of residual U-Net could be a suitable model for further development for a computer-aided system for navigation and guidance through the urinary system.

preprint2021arXiv

An Online Framework for Cognitive Load Assessment in Assembly Tasks

The ongoing trend towards Industry 4.0 has revolutionised ordinary workplaces, profoundly changing the role played by humans in the production chain. Research on ergonomics in industrial settings mainly focuses on reducing the operator's physical fatigue and discomfort to improve throughput and avoid safety hazards. However, as the production complexity increases, the cognitive resources demand and mental workload could compromise the operator's performance and the efficiency of the shop floor workplace. State-of-the-art methods in cognitive science work offline and/or involve bulky equipment hardly deployable in industrial settings. This paper presents a novel method for online assessment of cognitive load in manufacturing, primarily assembly, by detecting patterns in human motion directly from the input images of a stereo camera. Head pose estimation and skeleton tracking are exploited to investigate the workers' attention and assess hyperactivity and unforeseen movements. Pilot experiments suggest that our factor assessment tool provides significant insights into workers' mental workload, even confirmed by correlations with physiological and performance measurements. According to data gathered in this study, a vision-based cognitive load assessment has the potential to be integrated into the development of mechatronic systems for improving cognitive ergonomics in manufacturing.

preprint2020arXiv

Comparison of different CNNs for breast tumor classification from ultrasound images

Breast cancer is one of the deadliest cancer worldwide. Timely detection could reduce mortality rates. In the clinical routine, classifying benign and malignant tumors from ultrasound (US) imaging is a crucial but challenging task. An automated method, which can deal with the variability of data is therefore needed. In this paper, we compared different Convolutional Neural Networks (CNNs) and transfer learning methods for the task of automated breast tumor classification. The architectures investigated in this study were VGG-16 and Inception V3. Two different training strategies were investigated: the first one was using pretrained models as feature extractors and the second one was to fine-tune the pre-trained models. A total of 947 images were used, 587 corresponded to US images of benign tumors and 360 with malignant tumors. 678 images were used for the training and validation process, while 269 images were used for testing the models. Accuracy and Area Under the receiver operating characteristic Curve (AUC) were used as performance metrics. The best performance was obtained by fine tuning VGG-16, with an accuracy of 0.919 and an AUC of 0.934. The obtained results open the opportunity to further investigation with a view of improving cancer detection.