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Researcher profile

Wei Shao

Wei Shao contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate
Machine LearningComputation and LanguageComputer Visioneess.IVArtificial IntelligenceDatabaseseess.SPeess.SYGenomicsHuman-Computer InteractionInformation RetrievalQuantitative MethodsSocial and Information NetworksSystems and Control

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Published work

12 published item(s)

preprint2026arXiv

Multi-domain Multi-modal Document Classification Benchmark with a Multi-level Taxonomy

Document classification forms the backbone of modern enterprise content management, yet existing benchmarks remain trapped in oversimplified paradigms -- single domain settings with flat label structures -- that bear little resemblance to the hierarchical, multi-modal, and cross-domain nature of real-world business documents. This gap not only misrepresents practical complexity but also stifles progress toward industrially viable document intelligence. To bridge this gap, we construct the first Multi-level, Multi-domain, Multi-modal document classification Benchmark (MMM-Bench). MMM-Bench includes (1) a deeply hierarchical taxonomy spanning five levels that capture the authentic organizational logic of business documentation; and (2) 5,990 real-world multi-modal documents meticulously curated from 12 commercial domains in Alibaba. Each document is manually annotated with a complete hierarchical path by domain experts. We establish comprehensive baselines on MMM-Bench, which consists of open-weight models and API-based models. Through systematic experiments, we identify four fundamental challenges within MMM-Bench and propose corresponding insights. To provide a solid foundation for advancing research in multi-level, multi-domain document classification, we release all of the data and the evaluation toolkit of MMM-Bench at https://github.com/MMMDC-Bench/MMMDC-Bench.

0 citations0 reviewsNo code linkedOpen access
preprint2023arXiv

Multiple-level Point Embedding for Solving Human Trajectory Imputation with Prediction

Sparsity is a common issue in many trajectory datasets, including human mobility data. This issue frequently brings more difficulty to relevant learning tasks, such as trajectory imputation and prediction. Nowadays, little existing work simultaneously deals with imputation and prediction on human trajectories. This work plans to explore whether the learning process of imputation and prediction could benefit from each other to achieve better outcomes. And the question will be answered by studying the coexistence patterns between missing points and observed ones in incomplete trajectories. More specifically, the proposed model develops an imputation component based on the self-attention mechanism to capture the coexistence patterns between observations and missing points among encoder-decoder layers. Meanwhile, a recurrent unit is integrated to extract the sequential embeddings from newly imputed sequences for predicting the following location. Furthermore, a new implementation called Imputation Cycle is introduced to enable gradual imputation with prediction enhancement at multiple levels, which helps to accelerate the speed of convergence. The experimental results on three different real-world mobility datasets show that the proposed approach has significant advantages over the competitive baselines across both imputation and prediction tasks in terms of accuracy and stability.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

A Sentence is Worth 128 Pseudo Tokens: A Semantic-Aware Contrastive Learning Framework for Sentence Embeddings

Contrastive learning has shown great potential in unsupervised sentence embedding tasks, e.g., SimCSE. However, We find that these existing solutions are heavily affected by superficial features like the length of sentences or syntactic structures. In this paper, we propose a semantics-aware contrastive learning framework for sentence embeddings, termed Pseudo-Token BERT (PT-BERT), which is able to exploit the pseudo-token space (i.e., latent semantic space) representation of a sentence while eliminating the impact of superficial features such as sentence length and syntax. Specifically, we introduce an additional pseudo token embedding layer independent of the BERT encoder to map each sentence into a sequence of pseudo tokens in a fixed length. Leveraging these pseudo sequences, we are able to construct same-length positive and negative pairs based on the attention mechanism to perform contrastive learning. In addition, we utilize both the gradient-updating and momentum-updating encoders to encode instances while dynamically maintaining an additional queue to store the representation of sentence embeddings, enhancing the encoder's learning performance for negative examples. Experiments show that our model outperforms the state-of-the-art baselines on six standard semantic textual similarity (STS) tasks. Furthermore, experiments on alignments and uniformity losses, as well as hard examples with different sentence lengths and syntax, consistently verify the effectiveness of our method.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Long-term Spatio-temporal Forecasting via Dynamic Multiple-Graph Attention

Many real-world ubiquitous applications, such as parking recommendations and air pollution monitoring, benefit significantly from accurate long-term spatio-temporal forecasting (LSTF). LSTF makes use of long-term dependency between spatial and temporal domains, contextual information, and inherent pattern in the data. Recent studies have revealed the potential of multi-graph neural networks (MGNNs) to improve prediction performance. However, existing MGNN methods cannot be directly applied to LSTF due to several issues: the low level of generality, insufficient use of contextual information, and the imbalanced graph fusion approach. To address these issues, we construct new graph models to represent the contextual information of each node and the long-term spatio-temporal data dependency structure. To fuse the information across multiple graphs, we propose a new dynamic multi-graph fusion module to characterize the correlations of nodes within a graph and the nodes across graphs via the spatial attention and graph attention mechanisms. Furthermore, we introduce a trainable weight tensor to indicate the importance of each node in different graphs. Extensive experiments on two large-scale datasets demonstrate that our proposed approaches significantly improve the performance of existing graph neural network models in LSTF prediction tasks.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Measuring disentangled generative spatio-temporal representation

Disentangled representation learning offers useful properties such as dimension reduction and interpretability, which are essential to modern deep learning approaches. Although deep learning techniques have been widely applied to spatio-temporal data mining, there has been little attention to further disentangle the latent features and understanding their contribution to the model performance, particularly their mutual information and correlation across features. In this study, we adopt two state-of-the-art disentangled representation learning methods and apply them to three large-scale public spatio-temporal datasets. To evaluate their performance, we propose an internal evaluation metric focusing on the degree of correlations among latent variables of the learned representations and the prediction performance of the downstream tasks. Empirical results show that our modified method can learn disentangled representations that achieve the same level of performance as existing state-of-the-art ST deep learning methods in a spatio-temporal sequence forecasting problem. Additionally, we find that our methods can be used to discover real-world spatial-temporal semantics to describe the variables in the learned representation.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Towards Better Understanding with Uniformity and Explicit Regularization of Embeddings in Embedding-based Neural Topic Models

Embedding-based neural topic models could explicitly represent words and topics by embedding them to a homogeneous feature space, which shows higher interpretability. However, there are no explicit constraints for the training of embeddings, leading to a larger optimization space. Also, a clear description of the changes in embeddings and the impact on model performance is still lacking. In this paper, we propose an embedding regularized neural topic model, which applies the specially designed training constraints on word embedding and topic embedding to reduce the optimization space of parameters. To reveal the changes and roles of embeddings, we introduce \textbf{uniformity} into the embedding-based neural topic model as the evaluation metric of embedding space. On this basis, we describe how embeddings tend to change during training via the changes in the uniformity of embeddings. Furthermore, we demonstrate the impact of changes in embeddings in embedding-based neural topic models through ablation studies. The results of experiments on two mainstream datasets indicate that our model significantly outperforms baseline models in terms of the harmony between topic quality and document modeling. This work is the first attempt to exploit uniformity to explore changes in embeddings of embedding-based neural topic models and their impact on model performance to the best of our knowledge.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

FADACS: A Few-shot Adversarial Domain Adaptation Architecture for Context-Aware Parking Availability Sensing

Existing research on parking availability sensing mainly relies on extensive contextual and historical information. In practice, the availability of such information is a challenge as it requires continuous collection of sensory signals. In this study, we design an end-to-end transfer learning framework for parking availability sensing to predict parking occupancy in areas in which the parking data is insufficient to feed into data-hungry models. This framework overcomes two main challenges: 1) many real-world cases cannot provide enough data for most existing data-driven models, and 2) it is difficult to merge sensor data and heterogeneous contextual information due to the differing urban fabric and spatial characteristics. Our work adopts a widely-used concept, adversarial domain adaptation, to predict the parking occupancy in an area without abundant sensor data by leveraging data from other areas with similar features. In this paper, we utilise more than 35 million parking data records from sensors placed in two different cities, one a city centre and the other a coastal tourist town. We also utilise heterogeneous spatio-temporal contextual information from external resources, including weather and points of interest. We quantify the strength of our proposed framework in different cases and compare it to the existing data-driven approaches. The results show that the proposed framework is comparable to existing state-of-the-art methods and also provide some valuable insights on parking availability prediction.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Adaptive Feature Selection Guided Deep Forest for COVID-19 Classification with Chest CT

Chest computed tomography (CT) becomes an effective tool to assist the diagnosis of coronavirus disease-19 (COVID-19). Due to the outbreak of COVID-19 worldwide, using the computed-aided diagnosis technique for COVID-19 classification based on CT images could largely alleviate the burden of clinicians. In this paper, we propose an Adaptive Feature Selection guided Deep Forest (AFS-DF) for COVID-19 classification based on chest CT images. Specifically, we first extract location-specific features from CT images. Then, in order to capture the high-level representation of these features with the relatively small-scale data, we leverage a deep forest model to learn high-level representation of the features. Moreover, we propose a feature selection method based on the trained deep forest model to reduce the redundancy of features, where the feature selection could be adaptively incorporated with the COVID-19 classification model. We evaluated our proposed AFS-DF on COVID-19 dataset with 1495 patients of COVID-19 and 1027 patients of community acquired pneumonia (CAP). The accuracy (ACC), sensitivity (SEN), specificity (SPE) and AUC achieved by our method are 91.79%, 93.05%, 89.95% and 96.35%, respectively. Experimental results on the COVID-19 dataset suggest that the proposed AFS-DF achieves superior performance in COVID-19 vs. CAP classification, compared with 4 widely used machine learning methods.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

CorrSigNet: Learning CORRelated Prostate Cancer SIGnatures from Radiology and Pathology Images for Improved Computer Aided Diagnosis

Magnetic Resonance Imaging (MRI) is widely used for screening and staging prostate cancer. However, many prostate cancers have subtle features which are not easily identifiable on MRI, resulting in missed diagnoses and alarming variability in radiologist interpretation. Machine learning models have been developed in an effort to improve cancer identification, but current models localize cancer using MRI-derived features, while failing to consider the disease pathology characteristics observed on resected tissue. In this paper, we propose CorrSigNet, an automated two-step model that localizes prostate cancer on MRI by capturing the pathology features of cancer. First, the model learns MRI signatures of cancer that are correlated with corresponding histopathology features using Common Representation Learning. Second, the model uses the learned correlated MRI features to train a Convolutional Neural Network to localize prostate cancer. The histopathology images are used only in the first step to learn the correlated features. Once learned, these correlated features can be extracted from MRI of new patients (without histopathology or surgery) to localize cancer. We trained and validated our framework on a unique dataset of 75 patients with 806 slices who underwent MRI followed by prostatectomy surgery. We tested our method on an independent test set of 20 prostatectomy patients (139 slices, 24 cancerous lesions, 1.12M pixels) and achieved a per-pixel sensitivity of 0.81, specificity of 0.71, AUC of 0.86 and a per-lesion AUC of $0.96 \pm 0.07$, outperforming the current state-of-the-art accuracy in predicting prostate cancer using MRI.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

G-CREWE: Graph CompREssion With Embedding for Network Alignment

Network alignment is useful for multiple applications that require increasingly large graphs to be processed. Existing research approaches this as an optimization problem or computes the similarity based on node representations. However, the process of aligning every pair of nodes between relatively large networks is time-consuming and resource-intensive. In this paper, we propose a framework, called G-CREWE (Graph CompREssion With Embedding) to solve the network alignment problem. G-CREWE uses node embeddings to align the networks on two levels of resolution, a fine resolution given by the original network and a coarse resolution given by a compressed version, to achieve an efficient and effective network alignment. The framework first extracts node features and learns the node embedding via a Graph Convolutional Network (GCN). Then, node embedding helps to guide the process of graph compression and finally improve the alignment performance. As part of G-CREWE, we also propose a new compression mechanism called MERGE (Minimum dEgRee neiGhbors comprEssion) to reduce the size of the input networks while preserving the consistency in their topological structure. Experiments on all real networks show that our method is more than twice as fast as the most competitive existing methods while maintaining high accuracy.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Low-Rank Reorganization via Proportional Hazards Non-negative Matrix Factorization Unveils Survival Associated Gene Clusters

One of the central goals in precision health is the understanding and interpretation of high-dimensional biological data to identify genes and markers associated with disease initiation, development, and outcomes. Though significant effort has been committed to harness gene expression data for multiple analyses while accounting for time-to-event modeling by including survival times, many traditional analyses have focused separately on non-negative matrix factorization (NMF) of the gene expression data matrix and survival regression with Cox proportional hazards model. In this work, Cox proportional hazards regression is integrated with NMF by imposing survival constraints. This is accomplished by jointly optimizing the Frobenius norm and partial log likelihood for events such as death or relapse. Simulation results on synthetic data demonstrated the superiority of the proposed method, when compared to other algorithms, in finding survival associated gene clusters. In addition, using human cancer gene expression data, the proposed technique can unravel critical clusters of cancer genes. The discovered gene clusters reflect rich biological implications and can help identify survival-related biomarkers. Towards the goal of precision health and cancer treatments, the proposed algorithm can help understand and interpret high-dimensional heterogeneous genomics data with accurate identification of survival-associated gene clusters.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

n-Gage: Predicting in-class Emotional, Behavioural and Cognitive Engagement in the Wild

The study of student engagement has attracted growing interests to address problems such as low academic performance, disaffection, and high dropout rates. Existing approaches to measuring student engagement typically rely on survey-based instruments. While effective, those approaches are time-consuming and labour-intensive. Meanwhile, both the response rate and quality of the survey are usually poor. As an alternative, in this paper, we investigate whether we can infer and predict engagement at multiple dimensions, just using sensors. We hypothesize that multidimensional student engagement can be translated into physiological responses and activity changes during the class, and also be affected by the environmental changes. Therefore, we aim to explore the following questions: Can we measure the multiple dimensions of high school student's learning engagement including emotional, behavioural and cognitive engagement with sensing data in the wild? Can we derive the activity, physiological, and environmental factors contributing to the different dimensions of student engagement? If yes, which sensors are the most useful in differentiating each dimension of the engagement? Then, we conduct an in-situ study in a high school from 23 students and 6 teachers in 144 classes over 11 courses for 4 weeks. We present the n-Gage, a student engagement sensing system using a combination of sensors from wearables and environments to automatically detect student in-class multidimensional learning engagement. Experiment results show that n-Gage can accurately predict multidimensional student engagement in real-world scenarios with an average MAE of 0.788 and RMSE of 0.975 using all the sensors. We also show a set of interesting findings of how different factors (e.g., combinations of sensors, school subjects, CO2 level) affect each dimension of the student learning engagement.

0 citations0 reviewsNo code linkedOpen access