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Researcher profile

Robert Jenssen

Robert Jenssen contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate
Machine LearningComputer Visioneess.IVInformation Theorymath.ITArtificial Intelligencemath.STNeural and Evolutionary ComputingStatistics Theory

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Published work

20 published item(s)

preprint2026arXiv

NOFE - Neural Operator Function Embedding

Most dimensionality reduction methods treat data as discrete point clouds, ignoring the continuous domain structure inherent to many real-world processes. To bridge this gap, we introduce Neural Operator Function Embedding (NOFE), a domain-aware framework for continuous dimensionality reduction. NOFE learns function-to-function mappings via a Graph Kernel Operator, enabling mesh-free evaluation at arbitrary query locations independent of input discretization. We establish NOFE as approximation of sheaf-to-sheaf mappings, generalizing Sheaf Neural Networks to continuous domains. We evaluate NOFE across different datasets, comparing it against PCA, t-SNE, and UMAP. Our results demonstrate that NOFE significantly outperforms baselines in local structure preservation, achieving a local Stress of 0.111 compared to 0.398 for PCA, 0.773 for t-SNE, and 0.791 for UMAP for the ERA5 climate reanalysis dataset. NOFE also exhibits robust sampling independence, reducing the Patch Stitching Error by up to $20.0\times$ relative to UMAP (59.0 vs. 267.6 under regional normalization) and ensuring consistency across disjoint domain patches. While maintaining competitive global structure preservation (Stress-1: 0.379 vs. PCA's 0.268), NOFE resolves fine-grained structures and produces smooth, consistent embeddings that generalize across varying sample densities, addressing key limitations of discrete reduction methods.

0 citations0 reviewsNo code linkedOpen access
preprint2026arXiv

WindINR: Latent-State INR for Fast Local Wind Query and Correction in Complex Terrain

Many downstream decisions in complex terrain require fast wind estimates at a small number of user-specified locations and heights for a given forecast valid time, rather than another dense forecast field on a fixed grid. We present WindINR, a latent-state implicit neural representation framework for continuous high-resolution local wind query and sparse-observation correction. WindINR maps static terrain descriptors, a low-resolution background field, and continuous query coordinates to a high-resolution wind state through a latent-conditioned decoder. To enable rapid inference-time correction, WindINR separates reusable representation learning from sample-specific latent-state correction. During training, a privileged encoder infers a reference latent state from high-resolution supervision, a deployable latent predictor estimates an initial latent state from inference-time inputs alone, and their discrepancies are summarized into a dataset-adaptive Gaussian prior over latent corrections. At inference time, within the WindINR module, network weights remain fixed and only the latent state is updated by minimizing a regularized correction objective using sparse observations and their uncertainty. In controlled OSSEs over the Senja region, including a UAV-aided approach scenario and random-observation robustness tests, WindINR improves local high-resolution wind estimates by updating only a compact latent state rather than the full network. The corrected representation remains continuously queryable at arbitrary coordinates and, in our CPU benchmark, yields about a $2.6\times$ online-correction speedup over full-network fine-tuning, suggesting a practical interface between kilometer-scale background products, sparse local observations, and wind queries in complex terrain.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

A clinically motivated self-supervised approach for content-based image retrieval of CT liver images

Deep learning-based approaches for content-based image retrieval (CBIR) of CT liver images is an active field of research, but suffers from some critical limitations. First, they are heavily reliant on labeled data, which can be challenging and costly to acquire. Second, they lack transparency and explainability, which limits the trustworthiness of deep CBIR systems. We address these limitations by (1) proposing a self-supervised learning framework that incorporates domain-knowledge into the training procedure and (2) providing the first representation learning explainability analysis in the context of CBIR of CT liver images. Results demonstrate improved performance compared to the standard self-supervised approach across several metrics, as well as improved generalisation across datasets. Further, we conduct the first representation learning explainability analysis in the context of CBIR, which reveals new insights into the feature extraction process. Lastly, we perform a case study with cross-examination CBIR that demonstrates the usability of our proposed framework. We believe that our proposed framework could play a vital role in creating trustworthy deep CBIR systems that can successfully take advantage of unlabeled data.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Anomaly Detection-Inspired Few-Shot Medical Image Segmentation Through Self-Supervision With Supervoxels

Recent work has shown that label-efficient few-shot learning through self-supervision can achieve promising medical image segmentation results. However, few-shot segmentation models typically rely on prototype representations of the semantic classes, resulting in a loss of local information that can degrade performance. This is particularly problematic for the typically large and highly heterogeneous background class in medical image segmentation problems. Previous works have attempted to address this issue by learning additional prototypes for each class, but since the prototypes are based on a limited number of slices, we argue that this ad-hoc solution is insufficient to capture the background properties. Motivated by this, and the observation that the foreground class (e.g., one organ) is relatively homogeneous, we propose a novel anomaly detection-inspired approach to few-shot medical image segmentation in which we refrain from modeling the background explicitly. Instead, we rely solely on a single foreground prototype to compute anomaly scores for all query pixels. The segmentation is then performed by thresholding these anomaly scores using a learned threshold. Assisted by a novel self-supervision task that exploits the 3D structure of medical images through supervoxels, our proposed anomaly detection-inspired few-shot medical image segmentation model outperforms previous state-of-the-art approaches on two representative MRI datasets for the tasks of abdominal organ segmentation and cardiac segmentation.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Demonstrating The Risk of Imbalanced Datasets in Chest X-ray Image-based Diagnostics by Prototypical Relevance Propagation

The recent trend of integrating multi-source Chest X-Ray datasets to improve automated diagnostics raises concerns that models learn to exploit source-specific correlations to improve performance by recognizing the source domain of an image rather than the medical pathology. We hypothesize that this effect is enforced by and leverages label-imbalance across the source domains, i.e, prevalence of a disease corresponding to a source. Therefore, in this work, we perform a thorough study of the effect of label-imbalance in multi-source training for the task of pneumonia detection on the widely used ChestX-ray14 and CheXpert datasets. The results highlight and stress the importance of using more faithful and transparent self-explaining models for automated diagnosis, thus enabling the inherent detection of spurious learning. They further illustrate that this undesirable effect of learning spurious correlations can be reduced considerably when ensuring label-balanced source domain datasets.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Mixing Up Contrastive Learning: Self-Supervised Representation Learning for Time Series

The lack of labeled data is a key challenge for learning useful representation from time series data. However, an unsupervised representation framework that is capable of producing high quality representations could be of great value. It is key to enabling transfer learning, which is especially beneficial for medical applications, where there is an abundance of data but labeling is costly and time consuming. We propose an unsupervised contrastive learning framework that is motivated from the perspective of label smoothing. The proposed approach uses a novel contrastive loss that naturally exploits a data augmentation scheme in which new samples are generated by mixing two data samples with a mixing component. The task in the proposed framework is to predict the mixing component, which is utilized as soft targets in the loss function. Experiments demonstrate the framework's superior performance compared to other representation learning approaches on both univariate and multivariate time series and illustrate its benefits for transfer learning for clinical time series.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Principle of Relevant Information for Graph Sparsification

Graph sparsification aims to reduce the number of edges of a graph while maintaining its structural properties. In this paper, we propose the first general and effective information-theoretic formulation of graph sparsification, by taking inspiration from the Principle of Relevant Information (PRI). To this end, we extend the PRI from a standard scalar random variable setting to structured data (i.e., graphs). Our Graph-PRI objective is achieved by operating on the graph Laplacian, made possible by expressing the graph Laplacian of a subgraph in terms of a sparse edge selection vector $\mathbf{w}$. We provide both theoretical and empirical justifications on the validity of our Graph-PRI approach. We also analyze its analytical solutions in a few special cases. We finally present three representative real-world applications, namely graph sparsification, graph regularized multi-task learning, and medical imaging-derived brain network classification, to demonstrate the effectiveness, the versatility and the enhanced interpretability of our approach over prevalent sparsification techniques. Code of Graph-PRI is available at https://github.com/SJYuCNEL/PRI-Graphs

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

The Kernelized Taylor Diagram

This paper presents the kernelized Taylor diagram, a graphical framework for visualizing similarities between data populations. The kernelized Taylor diagram builds on the widely used Taylor diagram, which is used to visualize similarities between populations. However, the Taylor diagram has several limitations such as not capturing non-linear relationships and sensitivity to outliers. To address such limitations, we propose the kernelized Taylor diagram. Our proposed kernelized Taylor diagram is capable of visualizing similarities between populations with minimal assumptions of the data distributions. The kernelized Taylor diagram relates the maximum mean discrepancy and the kernel mean embedding in a single diagram, a construction that, to the best of our knowledge, have not been devised prior to this work. We believe that the kernelized Taylor diagram can be a valuable tool in data visualization.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Deep Image Translation with an Affinity-Based Change Prior for Unsupervised Multimodal Change Detection

Image translation with convolutional neural networks has recently been used as an approach to multimodal change detection. Existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. A main challenge in the unsupervised problem setting is to avoid that change pixels affect the learning of the translation function. We propose two new network architectures trained with loss functions weighted by priors that reduce the impact of change pixels on the learning objective. The change prior is derived in an unsupervised fashion from relational pixel information captured by domain-specific affinity matrices. Specifically, we use the vertex degrees associated with an absolute affinity difference matrix and demonstrate their utility in combination with cycle consistency and adversarial training. The proposed neural networks are compared with state-of-the-art algorithms. Experiments conducted on three real datasets show the effectiveness of our methodology.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Measuring Dependence with Matrix-based Entropy Functional

Measuring the dependence of data plays a central role in statistics and machine learning. In this work, we summarize and generalize the main idea of existing information-theoretic dependence measures into a higher-level perspective by the Shearer's inequality. Based on our generalization, we then propose two measures, namely the matrix-based normalized total correlation ($T_α^*$) and the matrix-based normalized dual total correlation ($D_α^*$), to quantify the dependence of multiple variables in arbitrary dimensional space, without explicit estimation of the underlying data distributions. We show that our measures are differentiable and statistically more powerful than prevalent ones. We also show the impact of our measures in four different machine learning problems, namely the gene regulatory network inference, the robust machine learning under covariate shift and non-Gaussian noises, the subspace outlier detection, and the understanding of the learning dynamics of convolutional neural networks (CNNs), to demonstrate their utilities, advantages, as well as implications to those problems. Code of our dependence measure is available at: https://bit.ly/AAAI-dependence

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Multi-modal land cover mapping of remote sensing images using pyramid attention and gated fusion networks

Multi-modality data is becoming readily available in remote sensing (RS) and can provide complementary information about the Earth's surface. Effective fusion of multi-modal information is thus important for various applications in RS, but also very challenging due to large domain differences, noise, and redundancies. There is a lack of effective and scalable fusion techniques for bridging multiple modality encoders and fully exploiting complementary information. To this end, we propose a new multi-modality network (MultiModNet) for land cover mapping of multi-modal remote sensing data based on a novel pyramid attention fusion (PAF) module and a gated fusion unit (GFU). The PAF module is designed to efficiently obtain rich fine-grained contextual representations from each modality with a built-in cross-level and cross-view attention fusion mechanism, and the GFU module utilizes a novel gating mechanism for early merging of features, thereby diminishing hidden redundancies and noise. This enables supplementary modalities to effectively extract the most valuable and complementary information for late feature fusion. Extensive experiments on two representative RS benchmark datasets demonstrate the effectiveness, robustness, and superiority of the MultiModNet for multi-modal land cover classification.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

SCG-Net: Self-Constructing Graph Neural Networks for Semantic Segmentation

Capturing global contextual representations by exploiting long-range pixel-pixel dependencies has shown to improve semantic segmentation performance. However, how to do this efficiently is an open question as current approaches of utilising attention schemes or very deep models to increase the models field of view, result in complex models with large memory consumption. Inspired by recent work on graph neural networks, we propose the Self-Constructing Graph (SCG) module that learns a long-range dependency graph directly from the image and uses it to propagate contextual information efficiently to improve semantic segmentation. The module is optimised via a novel adaptive diagonal enhancement method and a variational lower bound that consists of a customized graph reconstruction term and a Kullback-Leibler divergence regularization term. When incorporated into a neural network (SCG-Net), semantic segmentation is performed in an end-to-end manner and competitive performance (mean F1-scores of 92.0% and 89.8% respectively) on the publicly available ISPRS Potsdam and Vaihingen datasets is achieved, with much fewer parameters, and at a lower computational cost compared to related pure convolutional neural network (CNN) based models.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

A Kernel to Exploit Informative Missingness in Multivariate Time Series from EHRs

A large fraction of the electronic health records (EHRs) consists of clinical measurements collected over time, such as lab tests and vital signs, which provide important information about a patient's health status. These sequences of clinical measurements are naturally represented as time series, characterized by multiple variables and large amounts of missing data, which complicate the analysis. In this work, we propose a novel kernel which is capable of exploiting both the information from the observed values as well the information hidden in the missing patterns in multivariate time series (MTS) originating e.g. from EHRs. The kernel, called TCK$_{IM}$, is designed using an ensemble learning strategy in which the base models are novel mixed mode Bayesian mixture models which can effectively exploit informative missingness without having to resort to imputation methods. Moreover, the ensemble approach ensures robustness to hyperparameters and therefore TCK$_{IM}$ is particularly well suited if there is a lack of labels - a known challenge in medical applications. Experiments on three real-world clinical datasets demonstrate the effectiveness of the proposed kernel.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Code-Aligned Autoencoders for Unsupervised Change Detection in Multimodal Remote Sensing Images

Image translation with convolutional autoencoders has recently been used as an approach to multimodal change detection in bitemporal satellite images. A main challenge is the alignment of the code spaces by reducing the contribution of change pixels to the learning of the translation function. Many existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. We propose to extract relational pixel information captured by domain-specific affinity matrices at the input and use this to enforce alignment of the code spaces and reduce the impact of change pixels on the learning objective. A change prior is derived in an unsupervised fashion from pixel pair affinities that are comparable across domains. To achieve code space alignment we enforce that pixel with similar affinity relations in the input domains should be correlated also in code space. We demonstrate the utility of this procedure in combination with cycle consistency. The proposed approach are compared with state-of-the-art deep learning algorithms. Experiments conducted on four real datasets show the effectiveness of our methodology.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

LS-Net: Fast Single-Shot Line-Segment Detector

In low-altitude Unmanned Aerial Vehicle (UAV) flights, power lines are considered as one of the most threatening hazards and one of the most difficult obstacles to avoid. In recent years, many vision-based techniques have been proposed to detect power lines to facilitate self-driving UAVs and automatic obstacle avoidance. However, most of the proposed methods are typically based on a common three-step approach: (i) edge detection, (ii) the Hough transform, and (iii) spurious line elimination based on power line constrains. These approaches not only are slow and inaccurate but also require a huge amount of effort in post-processing to distinguish between power lines and spurious lines. In this paper, we introduce LS-Net, a fast single-shot line-segment detector, and apply it to power line detection. The LS-Net is by design fully convolutional and consists of three modules: (i) a fully convolutional feature extractor, (ii) a classifier, and (iii) a line segment regressor. Due to the unavailability of large datasets with annotations of power lines, we render synthetic images of power lines using the Physically Based Rendering (PBR) approach and propose a series of effective data augmentation techniques to generate more training data. With a customized version of the VGG-16 network as the backbone, the proposed approach outperforms existing state-of-the-art approaches. In addition, the LS-Net can detect power lines in near real-time (20.4 FPS). This suggests that our proposed approach has a promising role in automatic obstacle avoidance and as a valuable component of self-driving UAVs, especially for automatic autonomous power line inspection.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Multi-view Self-Constructing Graph Convolutional Networks with Adaptive Class Weighting Loss for Semantic Segmentation

We propose a novel architecture called the Multi-view Self-Constructing Graph Convolutional Networks (MSCG-Net) for semantic segmentation. Building on the recently proposed Self-Constructing Graph (SCG) module, which makes use of learnable latent variables to self-construct the underlying graphs directly from the input features without relying on manually built prior knowledge graphs, we leverage multiple views in order to explicitly exploit the rotational invariance in airborne images. We further develop an adaptive class weighting loss to address the class imbalance. We demonstrate the effectiveness and flexibility of the proposed method on the Agriculture-Vision challenge dataset and our model achieves very competitive results (0.547 mIoU) with much fewer parameters and at a lower computational cost compared to related pure-CNN based work. Code will be available at: github.com/samleoqh/MSCG-Net

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Reservoir computing approaches for representation and classification of multivariate time series

Classification of multivariate time series (MTS) has been tackled with a large variety of methodologies and applied to a wide range of scenarios. Reservoir Computing (RC) provides efficient tools to generate a vectorial, fixed-size representation of the MTS that can be further processed by standard classifiers. Despite their unrivaled training speed, MTS classifiers based on a standard RC architecture fail to achieve the same accuracy of fully trainable neural networks. In this paper we introduce the reservoir model space, an unsupervised approach based on RC to learn vectorial representations of MTS. Each MTS is encoded within the parameters of a linear model trained to predict a low-dimensional embedding of the reservoir dynamics. Compared to other RC methods, our model space yields better representations and attains comparable computational performance, thanks to an intermediate dimensionality reduction procedure. As a second contribution we propose a modular RC framework for MTS classification, with an associated open-source Python library. The framework provides different modules to seamlessly implement advanced RC architectures. The architectures are compared to other MTS classifiers, including deep learning models and time series kernels. Results obtained on benchmark and real-world MTS datasets show that RC classifiers are dramatically faster and, when implemented using our proposed representation, also achieve superior classification accuracy.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Self-Constructing Graph Convolutional Networks for Semantic Labeling

Graph Neural Networks (GNNs) have received increasing attention in many fields. However, due to the lack of prior graphs, their use for semantic labeling has been limited. Here, we propose a novel architecture called the Self-Constructing Graph (SCG), which makes use of learnable latent variables to generate embeddings and to self-construct the underlying graphs directly from the input features without relying on manually built prior knowledge graphs. SCG can automatically obtain optimized non-local context graphs from complex-shaped objects in aerial imagery. We optimize SCG via an adaptive diagonal enhancement method and a variational lower bound that consists of a customized graph reconstruction term and a Kullback-Leibler divergence regularization term. We demonstrate the effectiveness and flexibility of the proposed SCG on the publicly available ISPRS Vaihingen dataset and our model SCG-Net achieves competitive results in terms of F1-score with much fewer parameters and at a lower computational cost compared to related pure-CNN based work. Our code will be made public soon.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

The 1st Agriculture-Vision Challenge: Methods and Results

The first Agriculture-Vision Challenge aims to encourage research in developing novel and effective algorithms for agricultural pattern recognition from aerial images, especially for the semantic segmentation task associated with our challenge dataset. Around 57 participating teams from various countries compete to achieve state-of-the-art in aerial agriculture semantic segmentation. The Agriculture-Vision Challenge Dataset was employed, which comprises of 21,061 aerial and multi-spectral farmland images. This paper provides a summary of notable methods and results in the challenge. Our submission server and leaderboard will continue to open for researchers that are interested in this challenge dataset and task; the link can be found here.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Understanding Convolutional Neural Networks with Information Theory: An Initial Exploration

The matrix-based Renyi's α-entropy functional and its multivariate extension were recently developed in terms of the normalized eigenspectrum of a Hermitian matrix of the projected data in a reproducing kernel Hilbert space (RKHS). However, the utility and possible applications of these new estimators are rather new and mostly unknown to practitioners. In this paper, we first show that our estimators enable straightforward measurement of information flow in realistic convolutional neural networks (CNN) without any approximation. Then, we introduce the partial information decomposition (PID) framework and develop three quantities to analyze the synergy and redundancy in convolutional layer representations. Our results validate two fundamental data processing inequalities and reveal some fundamental properties concerning the training of CNN.

0 citations0 reviewsNo code linkedOpen access