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Rita Pucci

Rita Pucci contributes to research discovery and scholarly infrastructure.

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Published work

4 published item(s)

preprint2026arXiv

Exploring Clustering Capability of Inpainting Model Embeddings for Pattern-based Individual Identification

In this paper, we explore deep learning techniques for individual identification of animals based on their skin patterns. Individual identification is crucial in biodiversity monitoring, since it enables analysis of decline or growth of populations, or intra-species interactions within populations. Models trained for the task of individual identification often do not focus on the skin pattern of animals, but on background details or body shape details. These characteristics are not individually specific, or can change drastically through time. We focus on techniques that will make machine learning models more responsive to skin pattern structure when extracting individual visual embeddings from images. For this, we explore image inpainting of task-specific masks as an auxiliary task to enhance ML-based individual identification from animal skin patterns. We propose a comparative analysis among four models as an encoder backbone for the individual identification task. We focus on the case study of zebrafish, which is a widely recognized biological model organism, and which exhibits individually identifying skin patterns. To evaluate encoder backbone performance, we present standard metrics for classification accuracy, embedding clustering metrics, and GradCAM visualizations.

preprint2021arXiv

Collaboration among Image and Object Level Features for Image Colourisation

Image colourisation is an ill-posed problem, with multiple correct solutions which depend on the context and object instances present in the input datum. Previous approaches attacked the problem either by requiring intense user interactions or by exploiting the ability of convolutional neural networks (CNNs) in learning image level (context) features. However, obtaining human hints is not always feasible and CNNs alone are not able to learn object-level semantics unless multiple models pretrained with supervision are considered. In this work, we propose a single network, named UCapsNet, that separate image-level features obtained through convolutions and object-level features captured by means of capsules. Then, by skip connections over different layers, we enforce collaboration between such disentangling factors to produce high quality and plausible image colourisation. We pose the problem as a classification task that can be addressed by a fully self-supervised approach, thus requires no human effort. Experimental results on three benchmark datasets show that our approach outperforms existing methods on standard quality metrics and achieves a state of the art performances on image colourisation. A large scale user study shows that our method is preferred over existing solutions.

preprint2020arXiv

Machine learning approaches for identifying prey handling activity in otariid pinnipeds

Systems developed in wearable devices with sensors onboard are widely used to collect data of humans and animals activities with the perspective of an on-board automatic classification of data. An interesting application of these systems is to support animals' behaviour monitoring gathered by sensors' data analysis. This is a challenging area and in particular with fixed memories capabilities because the devices should be able to operate autonomously for long periods before being retrieved by human operators, and being able to classify activities onboard can significantly improve their autonomy. In this paper, we focus on the identification of prey handling activity in seals (when the animal start attaching and biting the prey), which is one of the main movement that identifies a successful foraging activity. Data taken into consideration are streams of 3D accelerometers and depth sensors values collected by devices attached directly on seals. To analyse these data, we propose an automatic model based on Machine Learning (ML) algorithms. In particular, we compare the performance (in terms of accuracy and F1score) of three ML algorithms: Input Delay Neural Networks, Support Vector Machines, and Echo State Networks. We attend to the final aim of developing an automatic classifier on-board. For this purpose, in this paper, the comparison is performed concerning the performance obtained by each ML approach developed and its memory footprint. In the end, we highlight the advantage of using an ML algorithm, in terms of feasibility in wild animals' monitoring.

preprint2020arXiv

WhoAmI: An Automatic Tool for Visual Recognition of Tiger and Leopard Individuals in the Wild

Photographs of wild animals in their natural habitats can be recorded unobtrusively via cameras that are triggered by motion nearby. The installation of such camera traps is becoming increasingly common across the world. Although this is a convenient source of invaluable data for biologists, ecologists and conservationists, the arduous task of poring through potentially millions of pictures each season introduces prohibitive costs and frustrating delays. We develop automatic algorithms that are able to detect animals, identify the species of animals and to recognize individual animals for two species. we propose the first fully-automatic tool that can recognize specific individuals of leopard and tiger due to their characteristic body markings. We adopt a class of supervised learning approach of machine learning where a Deep Convolutional Neural Network (DCNN) is trained using several instances of manually-labelled images for each of the three classification tasks. We demonstrate the effectiveness of our approach on a data set of camera-trap images recorded in the jungles of Southern India.