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Pavlos Protopapas

Pavlos Protopapas contributes to research discovery and scholarly infrastructure.

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Published work

24 published item(s)

preprint2026arXiv

Chebyshev-Augmented One-Shot Transfer Learning for PINNs on Nonlinear Differential Equations

Physics-Informed Neural Networks (PINNs) offer a flexible paradigm for solving differential equations by embedding governing laws into the training objective. A persistent limitation is instance specificity: standard PINNs typically require retraining for each new forcing term, boundary/initial condition, or parameter setting. One-shot transfer learning (OTL) addresses this bottleneck for linear operators by freezing a pretrained latent representation and computing optimal output weights in closed form, but for nonlinear problems closed-form adaptation is generally unavailable because the loss is nonconvex in the output layer. In this paper we substantially broaden the class of nonlinearities amenable to one-shot PINN transfer by combining OTL with Chebyshev polynomial surrogates. We approximate general smooth weakly nonlinear terms by truncated Chebyshev expansions over a prescribed solution range, yielding a polynomial nonlinearity that can be handled by a perturbative decomposition into linear subproblems. A multi-head PINN learns a reusable latent space associated with the dominant linear operator; at test time, solutions to new instances are obtained via a sequence of closed-form linear solves in the output layer, without retraining the network body. We provide a unified derivation of the framework for ODEs and PDEs and demonstrate accuracy and fast online adaptation on nonlinear benchmarks, including non-polynomial and singular ODE nonlinearities as well as a reaction-diffusion PDE with saturating kinetics, demonstrating the method's utility in many-query regimes.

preprint2026arXiv

Gradient Scaling Effects in Adaptive Spectral PINNs for Stiff Nonlinear ODEs

Physics-Informed Neural Networks (PINNs) often struggle to train reliably on stiff and oscillatory dynamical systems due to poor optimization conditioning. While prior work has emphasized representational remedies such as spectral parameterizations, the optimization implications of initial-condition (IC) embeddings in adaptive spectral PINNs have not been well characterized. In this work, we show that the choice of IC gating function induces explicit time-dependent gradient scaling, which interacts with spectral representations during training. Using a nonlinear stiff spring-pendulum ODE as a controlled benchmark, we compare exponential and linear IC gates in combination with fixed and adaptive Fourier spectral trunks. We observe stiffness-dependent changes in relative dominance for adaptive PINNs: at moderate stiffness ($k=20$), exponential gating often yields lower error but exhibits heterogeneous behavior across random seeds, whereas at higher stiffness ($k=60$), linear gating becomes preferable, with additional reversals observed at larger $k$. These trends hold for both relative $L^2$ error and maximum pointwise error and are confirmed by paired Wilcoxon signed-rank tests with Holm correction. Overall, our results demonstrate that IC embeddings are not a neutral design choice in PINNs: the induced gradient scaling materially shapes optimization conditioning in stiff regimes, with distinct sensitivity patterns in baseline and adaptive spectral models.

preprint2026arXiv

Improving Router Security using BERT

Previous work on home router security has shown that using system calls to train a transformer-based language model built on a BERT-style encoder using contrastive learning is effective in detecting several types of malware, but the performance remains limited at low false positive rates. In this work, we demonstrate that using a high-fidelity eBPF-based system call sensor, together with contrastive augmented learning (which introduces controlled mutations of negative samples), improves detection performance at a low false positive rate. In addition, we introduce a network packet abstraction language that enables the creation of a pipeline similar to network packet data, and we show that network behavior provides complementary detection signals-yielding improved performance for network-focused malware at low false positive rates. Lastly, we implement these methods in an online router anomaly detection framework to validate the approach in an Internet of Things (IoT) deployment environment.

preprint2026arXiv

PTL-PINNs: Perturbation-Guided Transfer Learning with Physics- Informed Neural Networks for Nonlinear Systems

Accurately and efficiently solving nonlinear differential equations is crucial for modeling dynamic behavior across science and engineering. Physics-Informed Neural Networks (PINNs) have emerged as a powerful solution that embeds physical laws in training by enforcing equation residuals. However, these struggle to model nonlinear dynamics, suffering from limited generalization across problems and long training times. To address these limitations, we propose a perturbation-guided transfer learning framework for PINNs (PTL-PINN), which integrates perturbation theory with transfer learning to efficiently solve nonlinear equations. Unlike gradient-based transfer learning, PTL-PINNs solve an approximate linear perturbative system using closed-form expressions, enabling rapid generalization with the time complexity of matrix-vector multiplication. We show that PTL-PINNs achieve accuracy comparable to various Runge-Kutta methods, with computational speeds up to one order of magnitude faster. To benchmark performance, we solve a broad set of problems, including nonlinear oscillators across various damping regimes, the equilibrium-centered Lotka-Volterra system, the KPP-Fisher and the Wave equation. Since perturbation theory sets the accuracy bound of PTL-PINNs, we systematically evaluate its practical applicability. This work connects long-standing perturbation methods with PINNs, demonstrating how perturbation theory can guide foundational models to solve nonlinear systems with speeds comparable to those of classical solvers.

preprint2022arXiv

Encoding Involutory Invariances in Neural Networks

In certain situations, neural networks are trained upon data that obey underlying symmetries. However, the predictions do not respect the symmetries exactly unless embedded in the network structure. In this work, we introduce architectures that embed a special kind of symmetry namely, invariance with respect to involutory linear/affine transformations up to parity $p=\pm 1$. We provide rigorous theorems to show that the proposed network ensures such an invariance and present qualitative arguments for a special universal approximation theorem. An adaption of our techniques to CNN tasks for datasets with inherent horizontal/vertical reflection symmetry is demonstrated. Extensive experiments indicate that the proposed model outperforms baseline feed-forward and physics-informed neural networks while identically respecting the underlying symmetry.

preprint2022arXiv

Evaluating Error Bound for Physics-Informed Neural Networks on Linear Dynamical Systems

There have been extensive studies on solving differential equations using physics-informed neural networks. While this method has proven advantageous in many cases, a major criticism lies in its lack of analytical error bounds. Therefore, it is less credible than its traditional counterparts, such as the finite difference method. This paper shows that one can mathematically derive explicit error bounds for physics-informed neural networks trained on a class of linear systems of differential equations. More importantly, evaluating such error bounds only requires evaluating the differential equation residual infinity norm over the domain of interest. Our work shows a link between network residuals, which is known and used as loss function, and the absolute error of solution, which is generally unknown. Our approach is semi-phenomonological and independent of knowledge of the actual solution or the complexity or architecture of the network. Using the method of manufactured solution on linear ODEs and system of linear ODEs, we empirically verify the error evaluation algorithm and demonstrate that the actual error strictly lies within our derived bound.

preprint2022arXiv

Hamiltonian neural networks for solving equations of motion

There has been a wave of interest in applying machine learning to study dynamical systems. We present a Hamiltonian neural network that solves the differential equations that govern dynamical systems. This is an equation-driven machine learning method where the optimization process of the network depends solely on the predicted functions without using any ground truth data. The model learns solutions that satisfy, up to an arbitrarily small error, Hamilton's equations and, therefore, conserve the Hamiltonian invariants. The choice of an appropriate activation function drastically improves the predictability of the network. Moreover, an error analysis is derived and states that the numerical errors depend on the overall network performance. The Hamiltonian network is then employed to solve the equations for the nonlinear oscillator and the chaotic Henon-Heiles dynamical system. In both systems, a symplectic Euler integrator requires two orders more evaluation points than the Hamiltonian network in order to achieve the same order of the numerical error in the predicted phase space trajectories.

preprint2022arXiv

Improving Astronomical Time-series Classification via Data Augmentation with Generative Adversarial Networks

Due to the latest advances in technology, telescopes with significant sky coverage will produce millions of astronomical alerts per night that must be classified both rapidly and automatically. Currently, classification consists of supervised machine learning algorithms whose performance is limited by the number of existing annotations of astronomical objects and their highly imbalanced class distributions. In this work, we propose a data augmentation methodology based on Generative Adversarial Networks (GANs) to generate a variety of synthetic light curves from variable stars. Our novel contributions, consisting of a resampling technique and an evaluation metric, can assess the quality of generative models in unbalanced datasets and identify GAN-overfitting cases that the Fréchet Inception Distance does not reveal. We applied our proposed model to two datasets taken from the Catalina and Zwicky Transient Facility surveys. The classification accuracy of variable stars is improved significantly when training with synthetic data and testing with real data with respect to the case of using only real data.

preprint2022arXiv

Multi-Task Learning based Convolutional Models with Curriculum Learning for the Anisotropic Reynolds Stress Tensor in Turbulent Duct Flow

The Reynolds-averaged Navier-Stokes (RANS) equations require accurate modeling of the anisotropic Reynolds stress tensor. Traditional closure models, while sophisticated, often only apply to restricted flow configurations. Researchers have started using machine learning approaches to tackle this problem by developing more general closure models informed by data. In this work we build upon recent convolutional neural network architectures used for turbulence modeling and propose a multi-task learning-based fully convolutional neural network that is able to accurately predict the normalized anisotropic Reynolds stress tensor for turbulent duct flows. Furthermore, we also explore the application of curriculum learning to data-driven turbulence modeling.

preprint2022arXiv

One-Shot Transfer Learning of Physics-Informed Neural Networks

Solving differential equations efficiently and accurately sits at the heart of progress in many areas of scientific research, from classical dynamical systems to quantum mechanics. There is a surge of interest in using Physics-Informed Neural Networks (PINNs) to tackle such problems as they provide numerous benefits over traditional numerical approaches. Despite their potential benefits for solving differential equations, transfer learning has been under explored. In this study, we present a general framework for transfer learning PINNs that results in one-shot inference for linear systems of both ordinary and partial differential equations. This means that highly accurate solutions to many unknown differential equations can be obtained instantaneously without retraining an entire network. We demonstrate the efficacy of the proposed deep learning approach by solving several real-world problems, such as first- and second-order linear ordinary equations, the Poisson equation, and the time-dependent Schrodinger complex-value partial differential equation.

preprint2022arXiv

Physics-Informed Neural Networks for Quantum Eigenvalue Problems

Eigenvalue problems are critical to several fields of science and engineering. We expand on the method of using unsupervised neural networks for discovering eigenfunctions and eigenvalues for differential eigenvalue problems. The obtained solutions are given in an analytical and differentiable form that identically satisfies the desired boundary conditions. The network optimization is data-free and depends solely on the predictions of the neural network. We introduce two physics-informed loss functions. The first, called ortho-loss, motivates the network to discover pair-wise orthogonal eigenfunctions. The second loss term, called norm-loss, requests the discovery of normalized eigenfunctions and is used to avoid trivial solutions. We find that embedding even or odd symmetries to the neural network architecture further improves the convergence for relevant problems. Lastly, a patience condition can be used to automatically recognize eigenfunction solutions. This proposed unsupervised learning method is used to solve the finite well, multiple finite wells, and hydrogen atom eigenvalue quantum problems.

preprint2022arXiv

RcTorch: a PyTorch Reservoir Computing Package with Automated Hyper-Parameter Optimization

Reservoir computers (RCs) are among the fastest to train of all neural networks, especially when they are compared to other recurrent neural networks. RC has this advantage while still handling sequential data exceptionally well. However, RC adoption has lagged other neural network models because of the model's sensitivity to its hyper-parameters (HPs). A modern unified software package that automatically tunes these parameters is missing from the literature. Manually tuning these numbers is very difficult, and the cost of traditional grid search methods grows exponentially with the number of HPs considered, discouraging the use of the RC and limiting the complexity of the RC models which can be devised. We address these problems by introducing RcTorch, a PyTorch based RC neural network package with automated HP tuning. Herein, we demonstrate the utility of RcTorch by using it to predict the complex dynamics of a driven pendulum being acted upon by varying forces. This work includes coding examples. Example Python Jupyter notebooks can be found on our GitHub repository https://github.com/blindedjoy/RcTorch and documentation can be found at https://rctorch.readthedocs.io/.

preprint2021arXiv

A New Artificial Neuron Proposal with Trainable Simultaneous Local and Global Activation Function

The activation function plays a fundamental role in the artificial neural network learning process. However, there is no obvious choice or procedure to determine the best activation function, which depends on the problem. This study proposes a new artificial neuron, named global-local neuron, with a trainable activation function composed of two components, a global and a local. The global component term used here is relative to a mathematical function to describe a general feature present in all problem domain. The local component is a function that can represent a localized behavior, like a transient or a perturbation. This new neuron can define the importance of each activation function component in the learning phase. Depending on the problem, it results in a purely global, or purely local, or a mixed global and local activation function after the training phase. Here, the trigonometric sine function was employed for the global component and the hyperbolic tangent for the local component. The proposed neuron was tested for problems where the target was a purely global function, or purely local function, or a composition of two global and local functions. Two classes of test problems were investigated, regression problems and differential equations solving. The experimental tests demonstrated the Global-Local Neuron network's superior performance, compared with simple neural networks with sine or hyperbolic tangent activation function, and with a hybrid network that combines these two simple neural networks.

preprint2021arXiv

Convolutional Neural Network Models and Interpretability for the Anisotropic Reynolds Stress Tensor in Turbulent One-dimensional Flows

The Reynolds-averaged Navier-Stokes (RANS) equations are widely used in turbulence applications. They require accurately modeling the anisotropic Reynolds stress tensor, for which traditional Reynolds stress closure models only yield reliable results in some flow configurations. In the last few years, there has been a surge of work aiming at using data-driven approaches to tackle this problem. The majority of previous work has focused on the development of fully-connected networks for modeling the anisotropic Reynolds stress tensor. In this paper, we expand upon recent work for turbulent channel flow and develop new convolutional neural network (CNN) models that are able to accurately predict the normalized anisotropic Reynolds stress tensor. We apply the new CNN model to a number of one-dimensional turbulent flows. Additionally, we present interpretability techniques that help drive the model design and provide guidance on the model behavior in relation to the underlying physics.

preprint2021arXiv

Matching Embeddings for Domain Adaptation

In this work we address the problem of transferring knowledge obtained from a vast annotated source domain to a low labeled target domain. We propose Adversarial Variational Domain Adaptation (AVDA), a semi-supervised domain adaptation method based on deep variational embedded representations. We use approximate inference and domain adversarial methods to map samples from source and target domains into an aligned class-dependent embedding defined as a Gaussian Mixture Model. AVDA works as a classifier and considers a generative model that helps this classification. We used digits dataset for experimentation. Our results show that on a semi-supervised few-shot scenario our model outperforms previous methods in most of the adaptation tasks, even using a fewer number of labeled samples per class on target domain.

preprint2020arXiv

Application of Machine Learning to Predict the Risk of Alzheimer's Disease: An Accurate and Practical Solution for Early Diagnostics

Alzheimer's Disease (AD) ravages the cognitive ability of more than 5 million Americans and creates an enormous strain on the health care system. This paper proposes a machine learning predictive model for AD development without medical imaging and with fewer clinical visits and tests, in hopes of earlier and cheaper diagnoses. That earlier diagnoses could be critical in the effectiveness of any drug or medical treatment to cure this disease. Our model is trained and validated using demographic, biomarker and cognitive test data from two prominent research studies: Alzheimer's Disease Neuroimaging Initiative (ADNI) and Australian Imaging, Biomarker Lifestyle Flagship Study of Aging (AIBL). We systematically explore different machine learning models, pre-processing methods and feature selection techniques. The most performant model demonstrates greater than 90% accuracy and recall in predicting AD, and the results generalize across sub-studies of ADNI and to the independent AIBL study. We also demonstrate that these results are robust to reducing the number of clinical visits or tests per visit. Using a metaclassification algorithm and longitudinal data analysis we are able to produce a "lean" diagnostic protocol with only 3 tests and 4 clinical visits that can predict Alzheimer's development with 87% accuracy and 79% recall. This novel work can be adapted into a practical early diagnostic tool for predicting the development of Alzheimer's that maximizes accuracy while minimizing the number of necessary diagnostic tests and clinical visits.

preprint2020arXiv

Gravitational Wave Detection and Information Extraction via Neural Networks

Laser Interferometer Gravitational-Wave Observatory (LIGO) was the first laboratory to measure the gravitational waves. It was needed an exceptional experimental design to measure distance changes much less than a radius of a proton. In the same way, the data analyses to confirm and extract information is a tremendously hard task. Here, it is shown a computational procedure base on artificial neural networks to detect a gravitation wave event and extract the knowledge of its ring-down time from the LIGO data. With this proposal, it is possible to make a probabilistic thermometer for gravitational wave detection and obtain physical information about the astronomical body system that created the phenomenon. Here, the ring-down time is determined with a direct data measure, without the need to use numerical relativity techniques and high computational power.

preprint2020arXiv

MPCC: Matching Priors and Conditionals for Clustering

Clustering is a fundamental task in unsupervised learning that depends heavily on the data representation that is used. Deep generative models have appeared as a promising tool to learn informative low-dimensional data representations. We propose Matching Priors and Conditionals for Clustering (MPCC), a GAN-based model with an encoder to infer latent variables and cluster categories from data, and a flexible decoder to generate samples from a conditional latent space. With MPCC we demonstrate that a deep generative model can be competitive/superior against discriminative methods in clustering tasks surpassing the state of the art over a diverse set of benchmark datasets. Our experiments show that adding a learnable prior and augmenting the number of encoder updates improve the quality of the generated samples, obtaining an inception score of 9.49 $\pm$ 0.15 and improving the Fréchet inception distance over the state of the art by a 46.9% in CIFAR10.

preprint2020arXiv

Scalable End-to-end Recurrent Neural Network for Variable star classification

During the last decade, considerable effort has been made to perform automatic classification of variable stars using machine learning techniques. Traditionally, light curves are represented as a vector of descriptors or features used as input for many algorithms. Some features are computationally expensive, cannot be updated quickly and hence for large datasets such as the LSST cannot be applied. Previous work has been done to develop alternative unsupervised feature extraction algorithms for light curves, but the cost of doing so still remains high. In this work, we propose an end-to-end algorithm that automatically learns the representation of light curves that allows an accurate automatic classification. We study a series of deep learning architectures based on Recurrent Neural Networks and test them in automated classification scenarios. Our method uses minimal data preprocessing, can be updated with a low computational cost for new observations and light curves, and can scale up to massive datasets. We transform each light curve into an input matrix representation whose elements are the differences in time and magnitude, and the outputs are classification probabilities. We test our method in three surveys: OGLE-III, Gaia and WISE. We obtain accuracies of about $95\%$ in the main classes and $75\%$ in the majority of subclasses. We compare our results with the Random Forest classifier and obtain competitive accuracies while being faster and scalable. The analysis shows that the computational complexity of our approach grows up linearly with the light curve size, while the traditional approach cost grows as $N\log{(N)}$.

preprint2020arXiv

Solving Differential Equations Using Neural Network Solution Bundles

The time evolution of dynamical systems is frequently described by ordinary differential equations (ODEs), which must be solved for given initial conditions. Most standard approaches numerically integrate ODEs producing a single solution whose values are computed at discrete times. When many varied solutions with different initial conditions to the ODE are required, the computational cost can become significant. We propose that a neural network be used as a solution bundle, a collection of solutions to an ODE for various initial states and system parameters. The neural network solution bundle is trained with an unsupervised loss that does not require any prior knowledge of the sought solutions, and the resulting object is differentiable in initial conditions and system parameters. The solution bundle exhibits fast, parallelizable evaluation of the system state, facilitating the use of Bayesian inference for parameter estimation in real dynamical systems.

preprint2020arXiv

Unsupervised Learning of Solutions to Differential Equations with Generative Adversarial Networks

Solutions to differential equations are of significant scientific and engineering relevance. Recently, there has been a growing interest in solving differential equations with neural networks. This work develops a novel method for solving differential equations with unsupervised neural networks that applies Generative Adversarial Networks (GANs) to \emph{learn the loss function} for optimizing the neural network. We present empirical results showing that our method, which we call Differential Equation GAN (DEQGAN), can obtain multiple orders of magnitude lower mean squared errors than an alternative unsupervised neural network method based on (squared) $L_2$, $L_1$, and Huber loss functions. Moreover, we show that DEQGAN achieves solution accuracy that is competitive with traditional numerical methods. Finally, we analyze the stability of our approach and find it to be sensitive to the selection of hyperparameters, which we provide in the appendix. Code available at https://github.com/dylanrandle/denn. Please address any electronic correspondence to dylanrandle@alumni.harvard.edu.

preprint2019arXiv

An Information Theory Approach on Deciding Spectroscopic Follow Ups

Classification and characterization of variable phenomena and transient phenomena are critical for astrophysics and cosmology. These objects are commonly studied using photometric time series or spectroscopic data. Given that many ongoing and future surveys are in time-domain and given that adding spectra provide further insights but requires more observational resources, it would be valuable to know which objects should we prioritize to have spectrum in addition to time series. We propose a methodology in a probabilistic setting that determines a-priory which objects are worth taking spectrum to obtain better insights, where we focus 'insight' as the type of the object (classification). Objects for which we query its spectrum are reclassified using their full spectrum information. We first train two classifiers, one that uses photometric data and another that uses photometric and spectroscopic data together. Then for each photometric object we estimate the probability of each possible spectrum outcome. We combine these models in various probabilistic frameworks (strategies) which are used to guide the selection of follow up observations. The best strategy depends on the intended use, whether it is getting more confidence or accuracy. For a given number of candidate objects (127, equal to 5% of the dataset) for taking spectra, we improve 37% class prediction accuracy as opposed to 20% of a non-naive (non-random) best base-line strategy. Our approach provides a general framework for follow-up strategies and can be extended beyond classification and to include other forms of follow-ups beyond spectroscopy.

preprint2019arXiv

Streaming Classification of Variable Stars

In the last years, automatic classification of variable stars has received substantial attention. Using machine learning techniques for this task has proven to be quite useful. Typically, machine learning classifiers used for this task require to have a fixed training set, and the training process is performed offline. Upcoming surveys such as the Large Synoptic Survey Telescope (LSST) will generate new observations daily, where an automatic classification system able to create alerts online will be mandatory. A system with those characteristics must be able to update itself incrementally. Unfortunately, after training, most machine learning classifiers do not support the inclusion of new observations in light curves, they need to re-train from scratch. Naively re-training from scratch is not an option in streaming settings, mainly because of the expensive pre-processing routines required to obtain a vector representation of light curves (features) each time we include new observations. In this work, we propose a streaming probabilistic classification model; it uses a set of newly designed features that work incrementally. With this model, we can have a machine learning classifier that updates itself in real time with new observations. To test our approach, we simulate a streaming scenario with light curves from CoRot, OGLE and MACHO catalogs. Results show that our model achieves high classification performance, staying an order of magnitude faster than traditional classification approaches.

preprint2014arXiv

The expansion rate of the intermediate Universe in light of Planck

We use cosmology-independent measurements of the expansion history in the redshift range 0.1 < z <1.2 and compare them with the Cosmic Microwave Background-derived expansion history predictions. The motivation is to investigate if the tension between the local (cosmology independent) Hubble constant H0 value and the Planck-derived H0 is also present at other redshifts. We conclude that there is no tension between Planck and cosmology independent-measurements of the Hubble parameter H(z) at 0.1 < z < 1.2 for the LCDM model (odds of tension are only 1:15, statistically not significant). Considering extensions of the LCDM model does not improve these odds (actually makes them worse), thus favouring the simpler model over its extensions. On the other hand the H(z) data are also not in tension with the local H0 measurements but the combination of all three data-sets shows a highly significant tension (odds ~ 1:400). Thus the new data deepen the mystery of the mismatch between Planck and local H0 measurements, and cannot univocally determine wether it is an effect localised at a particular redshift. Having said this, we find that assuming the NGC4258 maser distance as the correct anchor for H0, brings the odds to comfortable values. Further, using only the expansion history measurements we constrain, within the LCDM model, H0 = 68.5 +- 3.5 and Omega_m = 0.32 +- 0.05 without relying on any CMB prior. We also address the question of how smooth the expansion history of the universe is given the cosmology independent data and conclude that there is no evidence for deviations from smoothness on the expansion history, neither variations with time in the value of the equation of state of dark energy.