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Nello Blaser

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Published work

3 published item(s)

preprint2026arXiv

No Triangulation Without Representation: Generalization in Topological Deep Learning

Despite an ever-increasing interest in topological deep learning models that target higher-order datasets, there is no consensus on how to evaluate such models. This is exacerbated by the fact that topological objects permit operations, such as structural refinements, that are not appropriate for graph data. In this work, we extend MANTRA, a benchmark dataset containing manifold triangulations, to a larger class of manifolds with more diverse homeomorphism types. We show that, unlike prior claims, both graph neural networks (GNNs) and higher-order message passing (HOMP) methods can saturate the benchmark. However, we find that this is contingent on the right representation and feature assignment, emphasizing their importance in baseline models. We thus provide a novel evaluation protocol based on representational diversity and triangulation refinement. Surprisingly, we find no indication that existing models are capable of generalizing beyond the combinatorial structure of the data. This points towards a research gap in developing models that understand topological structure independent of scale. Our work thus provides the necessary scaffolding to evaluate future models and enable the development of topology-aware inductive biases.

preprint2022arXiv

ETH-tight algorithms for finding surfaces in simplicial complexes of bounded treewidth

Given a simplicial complex with $n$ simplices, we consider the Connected Subsurface Recognition (c-SR) problem of finding a subcomplex that is homeomorphic to a given connected surface with a fixed boundary. We also study the related Sum-of-Genus Subsurface Recognition (SoG) problem, where we instead search for a surface whose boundary, number of connected components, and total genus are given. For both of these problems, we give parameterized algorithms with respect to the treewidth $k$ of the Hasse diagram that run in $2^{O(k \log k)}n^{O(1)}$ time. For the SoG problem, we also prove that our algorithm is optimal assuming the exponential-time hypothesis. In fact, we prove the stronger result that our algorithm is ETH-tight even without restriction on the total genus.

preprint2020arXiv

Semi Conditional Variational Auto-Encoder for Flow Reconstruction and Uncertainty Quantification from Limited Observations

We present a new data-driven model to reconstruct nonlinear flow from spatially sparse observations. The model is a version of a conditional variational auto-encoder (CVAE), which allows for probabilistic reconstruction and thus uncertainty quantification of the prediction. We show that in our model, conditioning on the measurements from the complete flow data leads to a CVAE where only the decoder depends on the measurements. For this reason we call the model as Semi-Conditional Variational Autoencoder (SCVAE). The method, reconstructions and associated uncertainty estimates are illustrated on the velocity data from simulations of 2D flow around a cylinder and bottom currents from the Bergen Ocean Model. The reconstruction errors are compared to those of the Gappy Proper Orthogonal Decomposition (GPOD) method.