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Joyce C. Ho

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6 published item(s)

preprint2026arXiv

Anatomy of a Query: W5H Dimensions and FAR Patterns for Text-to-SQL Evaluation

Natural language interfaces to databases have gained popularity, yet the theoretical foundations for evaluating and designing these systems remain underdeveloped. We present QUEST (Query Understanding Evaluation through Semantic Translation), a framework resting on two independently motivated components: the FAR structural invariant, which holds that every well-formed query reduces to Filter, Aggregate, and Return operations; and the W5H dimensional framework, which holds that all filtering criteria map to six semantic dimensions (Who, What, Where, When, Why, and How). Validated across five text-to-SQL datasets (n = 120,464), FAR conformance is universal across all domains and schema types, while W5H dimensional profiles vary substantially. Healthcare queries are strongly concentrated in temporal (WHEN: 80.4%) and person-centric (WHO: 73.0%) dimensions far exceeding general-domain benchmarks, and causal (WHY) and mechanistic (HOW) reasoning are near-zero everywhere, with apparent HOW exceptions reflecting quantitative aggregation rather than genuine procedural reasoning. These results identify a frontier that must be crossed for genuine machine reasoning over structured data.

preprint2020arXiv

Domain-Guided Task Decomposition with Self-Training for Detecting Personal Events in Social Media

Mining social media content for tasks such as detecting personal experiences or events, suffer from lexical sparsity, insufficient training data, and inventive lexicons. To reduce the burden of creating extensive labeled data and improve classification performance, we propose to perform these tasks in two steps: 1. Decomposing the task into domain-specific sub-tasks by identifying key concepts, thus utilizing human domain understanding; and 2. Combining the results of learners for each key concept using co-training to reduce the requirements for labeled training data. We empirically show the effectiveness and generality of our approach, Co-Decomp, using three representative social media mining tasks, namely Personal Health Mention detection, Crisis Report detection, and Adverse Drug Reaction monitoring. The experiments show that our model is able to outperform the state-of-the-art text classification models--including those using the recently introduced BERT model--when small amounts of training data are available.

preprint2020arXiv

Spatio-Temporal Tensor Sketching via Adaptive Sampling

Mining massive spatio-temporal data can help a variety of real-world applications such as city capacity planning, event management, and social network analysis. The tensor representation can be used to capture the correlation between space and time and simultaneously exploit the latent structure of the spatial and temporal patterns in an unsupervised fashion. However, the increasing volume of spatio-temporal data has made it prohibitively expensive to store and analyze using tensor factorization. In this paper, we propose SkeTenSmooth, a novel tensor factorization framework that uses adaptive sampling to compress the tensor in a temporally streaming fashion and preserves the underlying global structure. SkeTenSmooth adaptively samples incoming tensor slices according to the detected data dynamics. Thus, the sketches are more representative and informative of the tensor dynamic patterns. In addition, we propose a robust tensor factorization method that can deal with the sketched tensor and recover the original patterns. Experiments on the New York City Yellow Taxi data show that SkeTenSmooth greatly reduces the memory cost and outperforms random sampling and fixed rate sampling method in terms of retaining the underlying patterns.

preprint2016arXiv

Phenotyping using Structured Collective Matrix Factorization of Multi--source EHR Data

The increased availability of electronic health records (EHRs) have spearheaded the initiative for precision medicine using data driven approaches. Essential to this effort is the ability to identify patients with certain medical conditions of interest from simple queries on EHRs, or EHR-based phenotypes. Existing rule--based phenotyping approaches are extremely labor intensive. Instead, dimensionality reduction and latent factor estimation techniques from machine learning can be adapted for phenotype extraction with no (or minimal) human supervision. We propose to identify an easily interpretable latent space shared across various sources of EHR data as potential candidates for phenotypes. By incorporating multiple EHR data sources (e.g., diagnosis, medications, and lab reports) available in heterogeneous datatypes in a generalized \textit{Collective Matrix Factorization (CMF)}, our methods can generate rich phenotypes. Further, easy interpretability in phenotyping application requires sparse representations of the candidate phenotypes, for example each phenotype derived from patients' medication and diagnosis data should preferably be represented by handful of diagnosis and medications, ($5$--$10$ active components). We propose a constrained formulation of CMF for estimating sparse phenotypes. We demonstrate the efficacy of our model through an extensive empirical study on EHR data from Vanderbilt University Medical Center.

preprint2013arXiv

Risk Prediction of a Multiple Sclerosis Diagnosis

Multiple sclerosis (MS) is a chronic autoimmune disease that affects the central nervous system. The progression and severity of MS varies by individual, but it is generally a disabling disease. Although medications have been developed to slow the disease progression and help manage symptoms, MS research has yet to result in a cure. Early diagnosis and treatment of the disease have been shown to be effective at slowing the development of disabilities. However, early MS diagnosis is difficult because symptoms are intermittent and shared with other diseases. Thus most previous works have focused on uncovering the risk factors associated with MS and predicting the progression of disease after a diagnosis rather than disease prediction. This paper investigates the use of data available in electronic medical records (EMRs) to create a risk prediction model; thereby helping clinicians perform the difficult task of diagnosing an MS patient. Our results demonstrate that even given a limited time window of patient data, one can achieve reasonable classification with an area under the receiver operating characteristic curve of 0.724. By restricting our features to common EMR components, the developed models also generalize to other healthcare systems.