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Joaquin Vanschoren

Joaquin Vanschoren contributes to research discovery and scholarly infrastructure.

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Published work

10 published item(s)

preprint2026arXiv

Croissant Baker: Metadata Generation for Discoverable, Governable, and Reusable ML Datasets

Croissant has emerged as the metadata standard for machine learning datasets, providing a structured, JSON-LD-based format that makes dataset discovery, automated ingestion, and reproducible analysis machine-checkable across ML platforms. Adoption has accelerated, and NeurIPS now requires Croissant metadata in every submission to its dataset tracks. Yet in practice Croissant generation usually starts with uploading data to a public platform, a path infeasible for governed and large local repositories that hold much of the high-value data ML increasingly relies on. We release Croissant Baker, a local-first, open-source command-line tool that generates validated Croissant metadata directly from a dataset directory through a modular handler registry. We evaluate Croissant Baker on over 140 datasets, scaling to MIMIC-IV at 886 million rows and 374 Parquet files. On held-out comparisons against producer-authored or standards-derived ground truth, Croissant Baker reaches 97-100% agreement across multiple domains.

preprint2022arXiv

Adaptation Strategies for Automated Machine Learning on Evolving Data

Automated Machine Learning (AutoML) systems have been shown to efficiently build good models for new datasets. However, it is often not clear how well they can adapt when the data evolves over time. The main goal of this study is to understand the effect of data stream challenges such as concept drift on the performance of AutoML methods, and which adaptation strategies can be employed to make them more robust. To that end, we propose 6 concept drift adaptation strategies and evaluate their effectiveness on different AutoML approaches. We do this for a variety of AutoML approaches for building machine learning pipelines, including those that leverage Bayesian optimization, genetic programming, and random search with automated stacking. These are evaluated empirically on real-world and synthetic data streams with different types of concept drift. Based on this analysis, we propose ways to develop more sophisticated and robust AutoML techniques.

preprint2022arXiv

Advances in MetaDL: AAAI 2021 challenge and workshop

To stimulate advances in metalearning using deep learning techniques (MetaDL), we organized in 2021 a challenge and an associated workshop. This paper presents the design of the challenge and its results, and summarizes presentations made at the workshop. The challenge focused on few-shot learning classification tasks of small images. Participants' code submissions were run in a uniform manner, under tight computational constraints. This put pressure on solution designs to use existing architecture backbones and/or pre-trained networks. Winning methods featured various classifiers trained on top of the second last layer of popular CNN backbones, fined-tuned on the meta-training data (not necessarily in an episodic manner), then trained on the labeled support and tested on the unlabeled query sets of the meta-test data.

preprint2022arXiv

Open-Ended Learning Strategies for Learning Complex Locomotion Skills

Teaching robots to learn diverse locomotion skills under complex three-dimensional environmental settings via Reinforcement Learning (RL) is still challenging. It has been shown that training agents in simple settings before moving them on to complex settings improves the training process, but so far only in the context of relatively simple locomotion skills. In this work, we adapt the Enhanced Paired Open-Ended Trailblazer (ePOET) approach to train more complex agents to walk efficiently on complex three-dimensional terrains. First, to generate more rugged and diverse three-dimensional training terrains with increasing complexity, we extend the Compositional Pattern Producing Networks - Neuroevolution of Augmenting Topologies (CPPN-NEAT) approach and include randomized shapes. Second, we combine ePOET with Soft Actor-Critic off-policy optimization, yielding ePOET-SAC, to ensure that the agent could learn more diverse skills to solve more challenging tasks. Our experimental results show that the newly generated three-dimensional terrains have sufficient diversity and complexity to guide learning, that ePOET successfully learns complex locomotion skills on these terrains, and that our proposed ePOET-SAC approach slightly improves upon ePOET.

preprint2022arXiv

Warm-starting DARTS using meta-learning

Neural architecture search (NAS) has shown great promise in the field of automated machine learning (AutoML). NAS has outperformed hand-designed networks and made a significant step forward in the field of automating the design of deep neural networks, thus further reducing the need for human expertise. However, most research is done targeting a single specific task, leaving research of NAS methods over multiple tasks mostly overlooked. Generally, there exist two popular ways to find an architecture for some novel task. Either searching from scratch, which is ineffective by design, or transferring discovered architectures from other tasks, which provides no performance guarantees and is probably not optimal. In this work, we present a meta-learning framework to warm-start Differentiable architecture search (DARTS). DARTS is a NAS method that can be initialized with a transferred architecture and is able to quickly adapt to new tasks. A task similarity measure is used to determine which transfer architecture is selected, as transfer architectures found on similar tasks will likely perform better. Additionally, we employ a simple meta-transfer architecture that was learned over multiple tasks. Experiments show that warm-started DARTS is able to find competitive performing architectures while reducing searching costs on average by 60%.

preprint2021arXiv

Fixed-point Quantization of Convolutional Neural Networks for Quantized Inference on Embedded Platforms

Convolutional Neural Networks (CNNs) have proven to be a powerful state-of-the-art method for image classification tasks. One drawback however is the high computational complexity and high memory consumption of CNNs which makes them unfeasible for execution on embedded platforms which are constrained on physical resources needed to support CNNs. Quantization has often been used to efficiently optimize CNNs for memory and computational complexity at the cost of a loss of prediction accuracy. We therefore propose a method to optimally quantize the weights, biases and activations of each layer of a pre-trained CNN while controlling the loss in inference accuracy to enable quantized inference. We quantize the 32-bit floating-point precision parameters to low bitwidth fixed-point representations thereby finding optimal bitwidths and fractional offsets for parameters of each layer of a given CNN. We quantize parameters of a CNN post-training without re-training it. Our method is designed to quantize parameters of a CNN taking into account how other parameters are quantized because ignoring quantization errors due to other quantized parameters leads to a low precision CNN with accuracy losses of up to 50% which is far beyond what is acceptable. Our final method therefore gives a low precision CNN with accuracy losses of less than 1%. As compared to a method used by commercial tools that quantize all parameters to 8-bits, our approach provides quantized CNN with averages of 53% lower memory consumption and 77.5% lower cost of executing multiplications for the two CNNs trained on the four datasets that we tested our work on. We find that layer-wise quantization of parameters significantly helps in this process.

preprint2021arXiv

Hyperboost: Hyperparameter Optimization by Gradient Boosting surrogate models

Bayesian Optimization is a popular tool for tuning algorithms in automatic machine learning (AutoML) systems. Current state-of-the-art methods leverage Random Forests or Gaussian processes to build a surrogate model that predicts algorithm performance given a certain set of hyperparameter settings. In this paper, we propose a new surrogate model based on gradient boosting, where we use quantile regression to provide optimistic estimates of the performance of an unobserved hyperparameter setting, and combine this with a distance metric between unobserved and observed hyperparameter settings to help regulate exploration. We demonstrate empirically that the new method is able to outperform some state-of-the art techniques across a reasonable sized set of classification problems.

preprint2021arXiv

Theory-based Habit Modeling for Enhancing Behavior Prediction

Psychological theories of habit posit that when a strong habit is formed through behavioral repetition, it can trigger behavior automatically in the same environment. Given the reciprocal relationship between habit and behavior, changing lifestyle behaviors (e.g., toothbrushing) is largely a task of breaking old habits and creating new and healthy ones. Thus, representing users' habit strengths can be very useful for behavior change support systems (BCSS), for example, to predict behavior or to decide when an intervention reaches its intended effect. However, habit strength is not directly observable and existing self-report measures are taxing for users. In this paper, built on recent computational models of habit formation, we propose a method to enable intelligent systems to compute habit strength based on observable behavior. The hypothesized advantage of using computed habit strength for behavior prediction was tested using data from two intervention studies, where we trained participants to brush their teeth twice a day for three weeks and monitored their behaviors using accelerometers. Through hierarchical cross-validation, we found that for the task of predicting future brushing behavior, computed habit strength clearly outperformed self-reported habit strength (in both studies) and was also superior to models based on past behavior frequency (in the larger second study). Our findings provide initial support for our theory-based approach of modeling user habits and encourages the use of habit computation to deliver personalized and adaptive interventions.

preprint2020arXiv

Importance of Tuning Hyperparameters of Machine Learning Algorithms

The performance of many machine learning algorithms depends on their hyperparameter settings. The goal of this study is to determine whether it is important to tune a hyperparameter or whether it can be safely set to a default value. We present a methodology to determine the importance of tuning a hyperparameter based on a non-inferiority test and tuning risk: the performance loss that is incurred when a hyperparameter is not tuned, but set to a default value. Because our methods require the notion of a default parameter, we present a simple procedure that can be used to determine reasonable default parameters. We apply our methods in a benchmark study using 59 datasets from OpenML. Our results show that leaving particular hyperparameters at their default value is non-inferior to tuning these hyperparameters. In some cases, leaving the hyperparameter at its default value even outperforms tuning it using a search procedure with a limited number of iterations.

preprint2017arXiv

OpenML: An R Package to Connect to the Machine Learning Platform OpenML

OpenML is an online machine learning platform where researchers can easily share data, machine learning tasks and experiments as well as organize them online to work and collaborate more efficiently. In this paper, we present an R package to interface with the OpenML platform and illustrate its usage in combination with the machine learning R package mlr. We show how the OpenML package allows R users to easily search, download and upload data sets and machine learning tasks. Furthermore, we also show how to upload results of experiments, share them with others and download results from other users. Beyond ensuring reproducibility of results, the OpenML platform automates much of the drudge work, speeds up research, facilitates collaboration and increases the users' visibility online.