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Researcher profile

Davide Bacciu

Davide Bacciu contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate
Machine LearningArtificial IntelligenceComputer VisionNeural and Evolutionary ComputingHuman-Computer InteractionApplicationscond-mat.softDistributed, Parallel, and Cluster Computingeess.SPphysics.comp-phSocial and Information NetworksSound

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Published work

27 published item(s)

preprint2026arXiv

Graph Hierarchical Recurrence for Long-Range Generalization

Graph Neural Networks (GNNs) and Graph Transformers (GTs) are now a fundamental paradigm for graph learning, combining the representation-learning capabilities of deep models with the sample efficiency induced by their inductive biases. Despite their effectiveness, a large body of work has shown that these models still face fundamental limitations in tasks that require capturing correlations between distant regions of a graph. To address this issue, we introduce Graph Hierarchical Recurrence (GHR), a novel framework that operates jointly on the input graph and on a hierarchical abstraction obtained through pooling. We also show that the limitations of existing models are even more pronounced in out-of-range generalization, where test instances involve interactions over distances longer than those observed during training. By contrast, despite its simple design, GHR provides three key advantages: strong performance on long-range dependencies, improved out-of-range generalization, and high parameter efficiency. To corroborate these claims, we show that across a broad set of long-range benchmarks, GHR consistently outperforms existing graph models while using as little as 1% of the parameters of current state-of-the-art models. These results suggest a complementary direction to the current trend of scaling architectures to obtain graph foundation models, indicating that increased model capacity alone may not be sufficient for generalization.

0 citations0 reviewsNo code linkedOpen access
preprint2026arXiv

Random-Set Graph Neural Networks

Uncertainty quantification has become an important factor in understanding the data representations produced by Graph Neural Networks (GNNs). Despite their predictive capabilities being ever useful across industrial workspaces, the inherent uncertainty induced by the nature of the data is a huge mitigating factor to GNN performance. While aleatoric uncertainty is the result of noisy and incomplete stochastic data such as missing edges or over-smoothing, epistemic uncertainty arises from lack of knowledge about a system or model (e.g., a graph's topology or node feature representation), which can be reduced by gathering more data and information. In this paper, we propose an original new framework in which node-level epistemic uncertainty is modelled in a belief function (finite random set) formalism. The resulting Random-Set Graph Neural Networks have a belief-function head predicting a random set over the list of classes, from which both a precise probability prediction and a measure of epistemic uncertainty can be obtained. Extensive experiments on 9 different graph learning datasets, including real-world autonomous driving benchmarks as such Nuscene and ROAD, demonstrate RS-GNN's superior uncertainty quantification capabilities

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

A Fair Comparison of Graph Neural Networks for Graph Classification

Experimental reproducibility and replicability are critical topics in machine learning. Authors have often raised concerns about their lack in scientific publications to improve the quality of the field. Recently, the graph representation learning field has attracted the attention of a wide research community, which resulted in a large stream of works. As such, several Graph Neural Network models have been developed to effectively tackle graph classification. However, experimental procedures often lack rigorousness and are hardly reproducible. Motivated by this, we provide an overview of common practices that should be avoided to fairly compare with the state of the art. To counter this troubling trend, we ran more than 47000 experiments in a controlled and uniform framework to re-evaluate five popular models across nine common benchmarks. Moreover, by comparing GNNs with structure-agnostic baselines we provide convincing evidence that, on some datasets, structural information has not been exploited yet. We believe that this work can contribute to the development of the graph learning field, by providing a much needed grounding for rigorous evaluations of graph classification models.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

AI-as-a-Service Toolkit for Human-Centered Intelligence in Autonomous Driving

This paper presents a proof-of-concept implementation of the AI-as-a-Service toolkit developed within the H2020 TEACHING project and designed to implement an autonomous driving personalization system according to the output of an automatic driver's stress recognition algorithm, both of them realizing a Cyber-Physical System of Systems. In addition, we implemented a data-gathering subsystem to collect data from different sensors, i.e., wearables and cameras, to automatize stress recognition. The system was attached for testing to a driving simulation software, CARLA, which allows testing the approach's feasibility with minimum cost and without putting at risk drivers and passengers. At the core of the relative subsystems, different learning algorithms were implemented using Deep Neural Networks, Recurrent Neural Networks, and Reinforcement Learning.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Avalanche RL: a Continual Reinforcement Learning Library

Continual Reinforcement Learning (CRL) is a challenging setting where an agent learns to interact with an environment that is constantly changing over time (the stream of experiences). In this paper, we describe Avalanche RL, a library for Continual Reinforcement Learning which allows to easily train agents on a continuous stream of tasks. Avalanche RL is based on PyTorch and supports any OpenAI Gym environment. Its design is based on Avalanche, one of the more popular continual learning libraries, which allow us to reuse a large number of continual learning strategies and improve the interaction between reinforcement learning and continual learning researchers. Additionally, we propose Continual Habitat-Lab, a novel benchmark and a high-level library which enables the usage of the photorealistic simulator Habitat-Sim for CRL research. Overall, Avalanche RL attempts to unify under a common framework continual reinforcement learning applications, which we hope will foster the growth of the field.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Continual Learning for Human State Monitoring

Continual Learning (CL) on time series data represents a promising but under-studied avenue for real-world applications. We propose two new CL benchmarks for Human State Monitoring. We carefully designed the benchmarks to mirror real-world environments in which new subjects are continuously added. We conducted an empirical evaluation to assess the ability of popular CL strategies to mitigate forgetting in our benchmarks. Our results show that, possibly due to the domain-incremental properties of our benchmarks, forgetting can be easily tackled even with a simple finetuning and that existing strategies struggle in accumulating knowledge over a fixed, held-out, test subject.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Continual Pre-Training Mitigates Forgetting in Language and Vision

Pre-trained models are nowadays a fundamental component of machine learning research. In continual learning, they are commonly used to initialize the model before training on the stream of non-stationary data. However, pre-training is rarely applied during continual learning. We formalize and investigate the characteristics of the continual pre-training scenario in both language and vision environments, where a model is continually pre-trained on a stream of incoming data and only later fine-tuned to different downstream tasks. We show that continually pre-trained models are robust against catastrophic forgetting and we provide strong empirical evidence supporting the fact that self-supervised pre-training is more effective in retaining previous knowledge than supervised protocols. Code is provided at https://github.com/AndreaCossu/continual-pretraining-nlp-vision .

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Continual-Learning-as-a-Service (CLaaS): On-Demand Efficient Adaptation of Predictive Models

Predictive machine learning models nowadays are often updated in a stateless and expensive way. The two main future trends for companies that want to build machine learning-based applications and systems are real-time inference and continual updating. Unfortunately, both trends require a mature infrastructure that is hard and costly to realize on-premise. This paper defines a novel software service and model delivery infrastructure termed Continual Learning-as-a-Service (CLaaS) to address these issues. Specifically, it embraces continual machine learning and continuous integration techniques. It provides support for model updating and validation tools for data scientists without an on-premise solution and in an efficient, stateful and easy-to-use manner. Finally, this CL model service is easy to encapsulate in any machine learning infrastructure or cloud system. This paper presents the design and implementation of a CLaaS instantiation, called LiquidBrain, evaluated in two real-world scenarios. The former is a robotic object recognition setting using the CORe50 dataset while the latter is a named category and attribute prediction using the DeepFashion-C dataset in the fashion domain. Our preliminary results suggest the usability and efficiency of the Continual Learning model services and the effectiveness of the solution in addressing real-world use-cases regardless of where the computation happens in the continuum Edge-Cloud.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Deep Features for CBIR with Scarce Data using Hebbian Learning

Features extracted from Deep Neural Networks (DNNs) have proven to be very effective in the context of Content Based Image Retrieval (CBIR). In recent work, biologically inspired \textit{Hebbian} learning algorithms have shown promises for DNN training. In this contribution, we study the performance of such algorithms in the development of feature extractors for CBIR tasks. Specifically, we consider a semi-supervised learning strategy in two steps: first, an unsupervised pre-training stage is performed using Hebbian learning on the image dataset; second, the network is fine-tuned using supervised Stochastic Gradient Descent (SGD) training. For the unsupervised pre-training stage, we explore the nonlinear Hebbian Principal Component Analysis (HPCA) learning rule. For the supervised fine-tuning stage, we assume sample efficiency scenarios, in which the amount of labeled samples is just a small fraction of the whole dataset. Our experimental analysis, conducted on the CIFAR10 and CIFAR100 datasets shows that, when few labeled samples are available, our Hebbian approach provides relevant improvements compared to various alternative methods.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Federated Adaptation of Reservoirs via Intrinsic Plasticity

We propose a novel algorithm for performing federated learning with Echo State Networks (ESNs) in a client-server scenario. In particular, our proposal focuses on the adaptation of reservoirs by combining Intrinsic Plasticity with Federated Averaging. The former is a gradient-based method for adapting the reservoir's non-linearity in a local and unsupervised manner, while the latter provides the framework for learning in the federated scenario. We evaluate our approach on real-world datasets from human monitoring, in comparison with the previous approach for federated ESNs existing in literature. Results show that adapting the reservoir with our algorithm provides a significant improvement on the performance of the global model.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Learning heuristics for A*

Path finding in graphs is one of the most studied classes of problems in computer science. In this context, search algorithms are often extended with heuristics for a more efficient search of target nodes. In this work we combine recent advancements in Neural Algorithmic Reasoning to learn efficient heuristic functions for path finding problems on graphs. At training time, we exploit multi-task learning to learn jointly the Dijkstra's algorithm and a consistent heuristic function for the A* search algorithm. At inference time, we plug our learnt heuristics into the A* algorithm. Results show that running A* over the learnt heuristics value can greatly speed up target node searching compared to Dijkstra, while still finding minimal-cost paths.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Leveraging Relational Information for Learning Weakly Disentangled Representations

Disentanglement is a difficult property to enforce in neural representations. This might be due, in part, to a formalization of the disentanglement problem that focuses too heavily on separating relevant factors of variation of the data in single isolated dimensions of the neural representation. We argue that such a definition might be too restrictive and not necessarily beneficial in terms of downstream tasks. In this work, we present an alternative view over learning (weakly) disentangled representations, which leverages concepts from relational learning. We identify the regions of the latent space that correspond to specific instances of generative factors, and we learn the relationships among these regions in order to perform controlled changes to the latent codes. We also introduce a compound generative model that implements such a weak disentanglement approach. Our experiments shows that the learned representations can separate the relevant factors of variation in the data, while preserving the information needed for effectively generating high quality data samples.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Modular Representations for Weak Disentanglement

The recently introduced weakly disentangled representations proposed to relax some constraints of the previous definitions of disentanglement, in exchange for more flexibility. However, at the moment, weak disentanglement can only be achieved by increasing the amount of supervision as the number of factors of variations of the data increase. In this paper, we introduce modular representations for weak disentanglement, a novel method that allows to keep the amount of supervised information constant with respect the number of generative factors. The experiments shows that models using modular representations can increase their performance with respect to previous work without the need of additional supervision.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Sample Condensation in Online Continual Learning

Online Continual learning is a challenging learning scenario where the model must learn from a non-stationary stream of data where each sample is seen only once. The main challenge is to incrementally learn while avoiding catastrophic forgetting, namely the problem of forgetting previously acquired knowledge while learning from new data. A popular solution in these scenario is to use a small memory to retain old data and rehearse them over time. Unfortunately, due to the limited memory size, the quality of the memory will deteriorate over time. In this paper we propose OLCGM, a novel replay-based continual learning strategy that uses knowledge condensation techniques to continuously compress the memory and achieve a better use of its limited size. The sample condensation step compresses old samples, instead of removing them like other replay strategies. As a result, the experiments show that, whenever the memory budget is limited compared to the complexity of the data, OLCGM improves the final accuracy compared to state-of-the-art replay strategies.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Studying the impact of magnitude pruning on contrastive learning methods

We study the impact of different pruning techniques on the representation learned by deep neural networks trained with contrastive loss functions. Our work finds that at high sparsity levels, contrastive learning results in a higher number of misclassified examples relative to models trained with traditional cross-entropy loss. To understand this pronounced difference, we use metrics such as the number of PIEs (Hooker et al., 2019), Q-Score (Kalibhat et al., 2022), and PD-Score (Baldock et al., 2021) to measure the impact of pruning on the learned representation quality. Our analysis suggests the schedule of the pruning method implementation matters. We find that the negative impact of sparsity on the quality of the learned representation is the highest when pruning is introduced early on in the training phase.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

A Gentle Introduction to Deep Learning for Graphs

The adaptive processing of graph data is a long-standing research topic which has been lately consolidated as a theme of major interest in the deep learning community. The snap increase in the amount and breadth of related research has come at the price of little systematization of knowledge and attention to earlier literature. This work is designed as a tutorial introduction to the field of deep learning for graphs. It favours a consistent and progressive introduction of the main concepts and architectural aspects over an exposition of the most recent literature, for which the reader is referred to available surveys. The paper takes a top-down view to the problem, introducing a generalized formulation of graph representation learning based on a local and iterative approach to structured information processing. It introduces the basic building blocks that can be combined to design novel and effective neural models for graphs. The methodological exposition is complemented by a discussion of interesting research challenges and applications in the field.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Accelerating the identification of informative reduced representations of proteins with deep learning for graphs

The limits of molecular dynamics (MD) simulations of macromolecules are steadily pushed forward by the relentless developments of computer architectures and algorithms. This explosion in the number and extent (in size and time) of MD trajectories induces the need of automated and transferable methods to rationalise the raw data and make quantitative sense out of them. Recently, an algorithmic approach was developed by some of us to identify the subset of a protein's atoms, or mapping, that enables the most informative description of it. This method relies on the computation, for a given reduced representation, of the associated mapping entropy, that is, a measure of the information loss due to the simplification. Albeit relatively straightforward, this calculation can be time consuming. Here, we describe the implementation of a deep learning approach aimed at accelerating the calculation of the mapping entropy. The method relies on deep graph networks, which provide extreme flexibility in the input format. We show that deep graph networks are accurate and remarkably efficient, with a speedup factor as large as $10^5$ with respect to the algorithmic computation of the mapping entropy. Applications of this method, which entails a great potential in the study of biomolecules when used to reconstruct its mapping entropy landscape, reach much farther than this, being the scheme easily transferable to the computation of arbitrary functions of a molecule's structure.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Edge-based sequential graph generation with recurrent neural networks

Graph generation with Machine Learning is an open problem with applications in various research fields. In this work, we propose to cast the generative process of a graph into a sequential one, relying on a node ordering procedure. We use this sequential process to design a novel generative model composed of two recurrent neural networks that learn to predict the edges of graphs: the first network generates one endpoint of each edge, while the second network generates the other endpoint conditioned on the state of the first. We test our approach extensively on five different datasets, comparing with two well-known baselines coming from graph literature, and two recurrent approaches, one of which holds state of the art performances. Evaluation is conducted considering quantitative and qualitative characteristics of the generated samples. Results show that our approach is able to yield novel, and unique graphs originating from very different distributions, while retaining structural properties very similar to those in the training sample. Under the proposed evaluation framework, our approach is able to reach performances comparable to the current state of the art on the graph generation task.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Encoding-based Memory Modules for Recurrent Neural Networks

Learning to solve sequential tasks with recurrent models requires the ability to memorize long sequences and to extract task-relevant features from them. In this paper, we study the memorization subtask from the point of view of the design and training of recurrent neural networks. We propose a new model, the Linear Memory Network, which features an encoding-based memorization component built with a linear autoencoder for sequences. We extend the memorization component with a modular memory that encodes the hidden state sequence at different sampling frequencies. Additionally, we provide a specialized training algorithm that initializes the memory to efficiently encode the hidden activations of the network. The experimental results on synthetic and real-world datasets show that specializing the training algorithm to train the memorization component always improves the final performance whenever the memorization of long sequences is necessary to solve the problem.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Generalising Recursive Neural Models by Tensor Decomposition

Most machine learning models for structured data encode the structural knowledge of a node by leveraging simple aggregation functions (in neural models, typically a weighted sum) of the information in the node's neighbourhood. Nevertheless, the choice of simple context aggregation functions, such as the sum, can be widely sub-optimal. In this work we introduce a general approach to model aggregation of structural context leveraging a tensor-based formulation. We show how the exponential growth in the size of the parameter space can be controlled through an approximation based on the Tucker tensor decomposition. This approximation allows limiting the parameters space size, decoupling it from its strict relation with the size of the hidden encoding space. By this means, we can effectively regulate the trade-off between expressivity of the encoding, controlled by the hidden size, computational complexity and model generalisation, influenced by parameterisation. Finally, we introduce a new Tensorial Tree-LSTM derived as an instance of our framework and we use it to experimentally assess our working hypotheses on tree classification scenarios.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Incremental Training of a Recurrent Neural Network Exploiting a Multi-Scale Dynamic Memory

The effectiveness of recurrent neural networks can be largely influenced by their ability to store into their dynamical memory information extracted from input sequences at different frequencies and timescales. Such a feature can be introduced into a neural architecture by an appropriate modularization of the dynamic memory. In this paper we propose a novel incrementally trained recurrent architecture targeting explicitly multi-scale learning. First, we show how to extend the architecture of a simple RNN by separating its hidden state into different modules, each subsampling the network hidden activations at different frequencies. Then, we discuss a training algorithm where new modules are iteratively added to the model to learn progressively longer dependencies. Each new module works at a slower frequency than the previous ones and it is initialized to encode the subsampled sequence of hidden activations. Experimental results on synthetic and real-world datasets on speech recognition and handwritten characters show that the modular architecture and the incremental training algorithm improve the ability of recurrent neural networks to capture long-term dependencies.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Learning Style-Aware Symbolic Music Representations by Adversarial Autoencoders

We address the challenging open problem of learning an effective latent space for symbolic music data in generative music modeling. We focus on leveraging adversarial regularization as a flexible and natural mean to imbue variational autoencoders with context information concerning music genre and style. Through the paper, we show how Gaussian mixtures taking into account music metadata information can be used as an effective prior for the autoencoder latent space, introducing the first Music Adversarial Autoencoder (MusAE). The empirical analysis on a large scale benchmark shows that our model has a higher reconstruction accuracy than state-of-the-art models based on standard variational autoencoders. It is also able to create realistic interpolations between two musical sequences, smoothly changing the dynamics of the different tracks. Experiments show that the model can organise its latent space accordingly to low-level properties of the musical pieces, as well as to embed into the latent variables the high-level genre information injected from the prior distribution to increase its overall performance. This allows us to perform changes to the generated pieces in a principled way.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Measuring the effects of confounders in medical supervised classification problems: the Confounding Index (CI)

Over the years, there has been growing interest in using Machine Learning techniques for biomedical data processing. When tackling these tasks, one needs to bear in mind that biomedical data depends on a variety of characteristics, such as demographic aspects (age, gender, etc) or the acquisition technology, which might be unrelated with the target of the analysis. In supervised tasks, failing to match the ground truth targets with respect to such characteristics, called confounders, may lead to very misleading estimates of the predictive performance. Many strategies have been proposed to handle confounders, ranging from data selection, to normalization techniques, up to the use of training algorithm for learning with imbalanced data. However, all these solutions require the confounders to be known a priori. To this aim, we introduce a novel index that is able to measure the confounding effect of a data attribute in a bias-agnostic way. This index can be used to quantitatively compare the confounding effects of different variables and to inform correction methods such as normalization procedures or ad-hoc-prepared learning algorithms. The effectiveness of this index is validated on both simulated data and real-world neuroimaging data.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

ROS-Neuro Integration of Deep Convolutional Autoencoders for EEG Signal Compression in Real-time BCIs

Typical EEG-based BCI applications require the computation of complex functions over the noisy EEG channels to be carried out in an efficient way. Deep learning algorithms are capable of learning flexible nonlinear functions directly from data, and their constant processing latency is perfect for their deployment into online BCI systems. However, it is crucial for the jitter of the processing system to be as low as possible, in order to avoid unpredictable behaviour that can ruin the system's overall usability. In this paper, we present a novel encoding method, based on on deep convolutional autoencoders, that is able to perform efficient compression of the raw EEG inputs. We deploy our model in a ROS-Neuro node, thus making it suitable for the integration in ROS-based BCI and robotic systems in real world scenarios. The experimental results show that our system is capable to generate meaningful compressed encoding preserving to original information contained in the raw input. They also show that the ROS-Neuro node is able to produce such encodings at a steady rate, with minimal jitter. We believe that our system can represent an important step towards the development of an effective BCI processing pipeline fully standardized in ROS-Neuro framework.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Tensor Decompositions in Deep Learning

The paper surveys the topic of tensor decompositions in modern machine learning applications. It focuses on three active research topics of significant relevance for the community. After a brief review of consolidated works on multi-way data analysis, we consider the use of tensor decompositions in compressing the parameter space of deep learning models. Lastly, we discuss how tensor methods can be leveraged to yield richer adaptive representations of complex data, including structured information. The paper concludes with a discussion on interesting open research challenges.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Tensor Decompositions in Recursive Neural Networks for Tree-Structured Data

The paper introduces two new aggregation functions to encode structural knowledge from tree-structured data. They leverage the Canonical and Tensor-Train decompositions to yield expressive context aggregation while limiting the number of model parameters. Finally, we define two novel neural recursive models for trees leveraging such aggregation functions, and we test them on two tree classification tasks, showing the advantage of proposed models when tree outdegree increases.

0 citations0 reviewsNo code linkedOpen access
preprint2020arXiv

Theoretically Expressive and Edge-aware Graph Learning

We propose a new Graph Neural Network that combines recent advancements in the field. We give theoretical contributions by proving that the model is strictly more general than the Graph Isomorphism Network and the Gated Graph Neural Network, as it can approximate the same functions and deal with arbitrary edge values. Then, we show how a single node information can flow through the graph unchanged.

0 citations0 reviewsNo code linkedOpen access