Ion-Induced Dipole Interactions and Fragmentation Times : Cαα -Cββ Chromophore Bond Dissociation Channel

preprint2015arXivOpen access

Abstract

The fragmentation times corresponding to the loss of the chromophore (Cαα-- Cββ bond dissociation channel) after photoexcitation at 263 nm have been investigated for several small peptides containing tryptophan or tyrosine. For tryptophan-containing peptides, the aromatic chromophore is lost as an ionic fragment (m/z 130), and the fragmentation time increases with the mass of the neutral fragment. In contrast, for tyrosine-containing peptides the aromatic chromophore is always lost as a neutral fragment (mass = 107 amu) and the fragmentation time is found to be fast (\textless{}20 ns). These different behaviors are explained by the role of the postfragmentation interaction in the complex formed after the Cαα--Cββ bond cleavage.

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