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Researcher profile

Silvia Zuffi

Silvia Zuffi contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate
Computer VisionMachine LearningArtificial Intelligenceeess.ASSound

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Published work

5 published item(s)

preprint2026arXiv

SAM 3D Animal: Promptable Animal 3D Reconstruction from Images in the Wild

3D animal reconstruction in the wild remains challenging due to large species variation, frequent occlusions, and the prevalence of multi-animal scenes, while existing methods predominantly focus on single-animal settings. We present SAM 3D Animal, the first promptable framework for multi-animal 3D reconstruction from a single image. Built on the SMAL+ parametric animal model, our method jointly reconstructs multiple instances and supports flexible prompts in the form of keypoints and masks which enable more reliable disambiguation in crowded and occluded scenes. To train such a model, we further introduce Herd3D, a multi-animal 3D dataset containing over 5K images, designed to increase diversity in species, interactions, and occlusion patterns. Experiments on the Animal3D, APTv2, and Animal Kingdom datasets show that our framework achieves state-of-the-art results over both existing model-based and model-free methods, demonstrating a scalable and effective solution for prompt-driven animal 3D reconstruction in the wild.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

BARC: Learning to Regress 3D Dog Shape from Images by Exploiting Breed Information

Our goal is to recover the 3D shape and pose of dogs from a single image. This is a challenging task because dogs exhibit a wide range of shapes and appearances, and are highly articulated. Recent work has proposed to directly regress the SMAL animal model, with additional limb scale parameters, from images. Our method, called BARC (Breed-Augmented Regression using Classification), goes beyond prior work in several important ways. First, we modify the SMAL shape space to be more appropriate for representing dog shape. But, even with a better shape model, the problem of regressing dog shape from an image is still challenging because we lack paired images with 3D ground truth. To compensate for the lack of paired data, we formulate novel losses that exploit information about dog breeds. In particular, we exploit the fact that dogs of the same breed have similar body shapes. We formulate a novel breed similarity loss consisting of two parts: One term encourages the shape of dogs from the same breed to be more similar than dogs of different breeds. The second one, a breed classification loss, helps to produce recognizable breed-specific shapes. Through ablation studies, we find that our breed losses significantly improve shape accuracy over a baseline without them. We also compare BARC qualitatively to WLDO with a perceptual study and find that our approach produces dogs that are significantly more realistic. This work shows that a-priori information about genetic similarity can help to compensate for the lack of 3D training data. This concept may be applicable to other animal species or groups of species. Our code is publicly available for research purposes at https://barc.is.tue.mpg.de/.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

Fish sounds: towards the evaluation of marine acoustic biodiversity through data-driven audio source separation

The marine ecosystem is changing at an alarming rate, exhibiting biodiversity loss and the migration of tropical species to temperate basins. Monitoring the underwater environments and their inhabitants is of fundamental importance to understand the evolution of these systems and implement safeguard policies. However, assessing and tracking biodiversity is often a complex task, especially in large and uncontrolled environments, such as the oceans. One of the most popular and effective methods for monitoring marine biodiversity is passive acoustics monitoring (PAM), which employs hydrophones to capture underwater sound. Many aquatic animals produce sounds characteristic of their own species; these signals travel efficiently underwater and can be detected even at great distances. Furthermore, modern technologies are becoming more and more convenient and precise, allowing for very accurate and careful data acquisition. To date, audio captured with PAM devices is frequently manually processed by marine biologists and interpreted with traditional signal processing techniques for the detection of animal vocalizations. This is a challenging task, as PAM recordings are often over long periods of time. Moreover, one of the causes of biodiversity loss is sound pollution; in data obtained from regions with loud anthropic noise, it is hard to separate the artificial from the fish sound manually. Nowadays, machine learning and, in particular, deep learning represents the state of the art for processing audio signals. Specifically, sound separation networks are able to identify and separate human voices and musical instruments. In this work, we show that the same techniques can be successfully used to automatically extract fish vocalizations in PAM recordings, opening up the possibility for biodiversity monitoring at a large scale.

0 citations0 reviewsNo code linkedOpen access
preprint2022arXiv

OSSO: Obtaining Skeletal Shape from Outside

We address the problem of inferring the anatomic skeleton of a person, in an arbitrary pose, from the 3D surface of the body; i.e. we predict the inside (bones) from the outside (skin). This has many applications in medicine and biomechanics. Existing state-of-the-art biomechanical skeletons are detailed but do not easily generalize to new subjects. Additionally, computer vision and graphics methods that predict skeletons are typically heuristic, not learned from data, do not leverage the full 3D body surface, and are not validated against ground truth. To our knowledge, our system, called OSSO (Obtaining Skeletal Shape from Outside), is the first to learn the mapping from the 3D body surface to the internal skeleton from real data. We do so using 1000 male and 1000 female dual-energy X-ray absorptiometry (DXA) scans. To these, we fit a parametric 3D body shape model (STAR) to capture the body surface and a novel part-based 3D skeleton model to capture the bones. This provides inside/outside training pairs. We model the statistical variation of full skeletons using PCA in a pose-normalized space. We then train a regressor from body shape parameters to skeleton shape parameters and refine the skeleton to satisfy constraints on physical plausibility. Given an arbitrary 3D body shape and pose, OSSO predicts a realistic skeleton inside. In contrast to previous work, we evaluate the accuracy of the skeleton shape quantitatively on held-out DXA scans, outperforming the state-of-the-art. We also show 3D skeleton prediction from varied and challenging 3D bodies. The code to infer a skeleton from a body shape is available for research at https://osso.is.tue.mpg.de/, and the dataset of paired outer surface (skin) and skeleton (bone) meshes is available as a Biobank Returned Dataset. This research has been conducted using the UK Biobank Resource.

0 citations0 reviewsNo code linkedOpen access
preprint2021arXiv

Seeing biodiversity: perspectives in machine learning for wildlife conservation

Data acquisition in animal ecology is rapidly accelerating due to inexpensive and accessible sensors such as smartphones, drones, satellites, audio recorders and bio-logging devices. These new technologies and the data they generate hold great potential for large-scale environmental monitoring and understanding, but are limited by current data processing approaches which are inefficient in how they ingest, digest, and distill data into relevant information. We argue that machine learning, and especially deep learning approaches, can meet this analytic challenge to enhance our understanding, monitoring capacity, and conservation of wildlife species. Incorporating machine learning into ecological workflows could improve inputs for population and behavior models and eventually lead to integrated hybrid modeling tools, with ecological models acting as constraints for machine learning models and the latter providing data-supported insights. In essence, by combining new machine learning approaches with ecological domain knowledge, animal ecologists can capitalize on the abundance of data generated by modern sensor technologies in order to reliably estimate population abundances, study animal behavior and mitigate human/wildlife conflicts. To succeed, this approach will require close collaboration and cross-disciplinary education between the computer science and animal ecology communities in order to ensure the quality of machine learning approaches and train a new generation of data scientists in ecology and conservation.

0 citations0 reviewsNo code linkedOpen access