Researcher profile

Sara Atito

Sara Atito contributes to research discovery and scholarly infrastructure.

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Published work

3 published item(s)

preprint2026arXiv

Information theoretic underpinning of self-supervised learning by clustering

Self-supervised learning (SSL) is recognized as an essential tool for building foundation models for Artificial Intelligence applications. The advances in SSL have been made thanks to vigorous arguments about the principles of SSL and through extensive empirical research. The aim of this paper is to contribute to the development of the underpinning theory of SSL, focusing on the deep clustering approach. By analogy to supervised learning, we formulate SSL as K-L divergence optimization. The mode collapse is prevented by imposing an optimisation constraint on the teacher distribution. This leads to normalization using inverse cluster priors. We show that using Jensen inequality this normalization simplifies to the popular batch centering procedure. Distillation and centering are common {heuristics-based} practices in SSL, {but our work underpins them theoretically.} The theoretical model developed not only supports specific existing successful SSL methods, but also suggests directions for future investigations.

preprint2022arXiv

GMML is All you Need

Vision transformers have generated significant interest in the computer vision community because of their flexibility in exploiting contextual information, whether it is sharply confined local, or long range global. However, they are known to be data hungry. This has motivated the research in self-supervised transformer pretraining, which does not need to decode the semantic information conveyed by labels to link it to the image properties, but rather focuses directly on extracting a concise representation of the image data that reflects the notion of similarity, and is invariant to nuisance factors. The key vehicle for the self-learning process used by the majority of self-learning methods is the generation of multiple views of the training data and the creation of pretext tasks which use these views to define the notion of image similarity, and data integrity. However, this approach lacks the natural propensity to extract contextual information. We propose group masked model learning (GMML), a self-supervised learning (SSL) mechanism for pretraining vision transformers with the ability to extract the contextual information present in all the concepts in an image. GMML achieves this by manipulating randomly groups of connected tokens, ensuingly covering a meaningful part of a semantic concept, and then recovering the hidden semantic information from the visible part of the concept. GMML implicitly introduces a novel data augmentation process. Unlike most of the existing SSL approaches, GMML does not require momentum encoder, nor rely on careful implementation details such as large batches and gradient stopping, which are all artefacts of most of the current self-supervised learning techniques. The source code is publicly available for the community to train on bigger corpora: https://github.com/Sara-Ahmed/GMML.

preprint2022arXiv

SB-SSL: Slice-Based Self-Supervised Transformers for Knee Abnormality Classification from MRI

The availability of large scale data with high quality ground truth labels is a challenge when developing supervised machine learning solutions for healthcare domain. Although, the amount of digital data in clinical workflows is increasing, most of this data is distributed on clinical sites and protected to ensure patient privacy. Radiological readings and dealing with large-scale clinical data puts a significant burden on the available resources, and this is where machine learning and artificial intelligence play a pivotal role. Magnetic Resonance Imaging (MRI) for musculoskeletal (MSK) diagnosis is one example where the scans have a wealth of information, but require a significant amount of time for reading and labeling. Self-supervised learning (SSL) can be a solution for handling the lack of availability of ground truth labels, but generally requires a large amount of training data during the pretraining stage. Herein, we propose a slice-based self-supervised deep learning framework (SB-SSL), a novel slice-based paradigm for classifying abnormality using knee MRI scans. We show that for a limited number of cases (<1000), our proposed framework is capable to identify anterior cruciate ligament tear with an accuracy of 89.17% and an AUC of 0.954, outperforming state-of-the-art without usage of external data during pretraining. This demonstrates that our proposed framework is suited for SSL in the limited data regime.