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Philipp Singer

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Published work

10 published item(s)

preprint2026arXiv

TabPFN-3: Technical Report

Tabular data underpins most high-value prediction problems in science and industry, and TabPFN has driven the foundation model revolution for this modality. Designed with feedback from our users, TabPFN-3 builds on this foundation to scale state-of-the-art performance to datasets with 1M training rows and substantially reduce training and inference time. Pretrained exclusively on synthetic data from our prior, TabPFN-3 dramatically pushes the frontier of tabular prediction and brings substantial gains on time series, relational, and tabular-text data. On the standard tabular benchmark TabArena, a forward pass of TabPFN-3 outperforms all other models, including tuned and ensembled baselines, by a significant margin, and pareto-dominates the speed/performance frontier. On more diverse datasets, TabPFN-3 ranks first on datasets with many classes, and beats 8-hour-tuned gradient-boosted-tree baselines on datasets up to 1M training rows and 200 features. TabPFN-3 introduces test-time compute scaling to tabular foundation models. Our API offering TabPFN-3-Plus (Thinking) exploits this to beat all non-TabPFN models by over 200 Elo on TabArena, rising to 420 Elo on the largest data subset, and outperforms AutoGluon 1.5 extreme while being 10x faster, without using LLMs, real data, internet search or any other model besides TabPFN. TabPFN-3 extends the capabilities of our models, enabling SOTA prediction on relational data (new SOTA foundation model on RelBenchV1) and tabular-text data (SOTA on TabSTAR via TabPFN-3-Plus); and improves existing integrations: a specialized checkpoint, TabPFN-TS-3, ranks 2nd on the time-series benchmark fev-bench, and SHAP-value computation is up to 120x faster. TabPFN-3 achieves this performance while being up to 20x faster than TabPFN-2.5. In addition, a reduced KV cache and row-chunking scale to 1M rows on one H100 with fast inference speed.

preprint2020arXiv

Backtesting the predictability of COVID-19

The advent of the COVID-19 pandemic has instigated unprecedented changes in many countries around the globe, putting a significant burden on the health sectors, affecting the macro economic conditions, and altering social interactions amongst the population. In response, the academic community has produced multiple forecasting models, approaches and algorithms to best predict the different indicators of COVID-19, such as the number of confirmed infected cases. Yet, researchers had little to no historical information about the pandemic at their disposal in order to inform their forecasting methods. Our work studies the predictive performance of models at various stages of the pandemic to better understand their fundamental uncertainty and the impact of data availability on such forecasts. We use historical data of COVID-19 infections from 253 regions from the period of 22nd January 2020 until 22nd June 2020 to predict, through a rolling window backtesting framework, the cumulative number of infected cases for the next 7 and 28 days. We implement three simple models to track the root mean squared logarithmic error in this 6-month span, a baseline model that always predicts the last known value of the cumulative confirmed cases, a power growth model and an epidemiological model called SEIRD. Prediction errors are substantially higher in early stages of the pandemic, resulting from limited data. Throughout the course of the pandemic, errors regress slowly, but steadily. The more confirmed cases a country exhibits at any point in time, the lower the error in forecasting future confirmed cases. We emphasize the significance of having a rigorous backtesting framework to accurately assess the predictive power of such models at any point in time during the outbreak which in turn can be used to assign the right level of certainty to these forecasts and facilitate better planning.

preprint2016arXiv

Discovering and Characterizing Mobility Patterns in Urban Spaces: A Study of Manhattan Taxi Data

Nowadays, human movement in urban spaces can be traced digitally in many cases. It can be observed that movement patterns are not constant, but vary across time and space. In this work,we characterize such spatio-temporal patterns with an innovative combination of two separate approaches that have been utilized for studying human mobility in the past. First, by using non-negative tensor factorization (NTF), we are able to cluster human behavior based on spatio-temporal dimensions. Second, for understanding these clusters, we propose to use HypTrails, a Bayesian approach for expressing and comparing hypotheses about human trails. To formalize hypotheses we utilize data that is publicly available on the Web, namely Foursquare data and census data provided by an open data platform. By applying this combination of approaches to taxi data in Manhattan, we can discover and explain different patterns in human mobility that cannot be identified in a collective analysis. As one example, we can find a group of taxi rides that end at locations with a high number of party venues (according to Foursquare) on weekend nights. Overall, our work demonstrates that human mobility is not one-dimensional but rather contains different facets both in time and space which we explain by utilizing online data. The findings of this paper argue for a more fine-grained analysis of human mobility in order to make more informed decisions for e.g., enhancing urban structures, tailored traffic control and location-based recommender systems.

preprint2016arXiv

Discovering Beaten Paths in Collaborative Ontology-Engineering Projects using Markov Chains

Biomedical taxonomies, thesauri and ontologies in the form of the International Classification of Diseases (ICD) as a taxonomy or the National Cancer Institute Thesaurus as an OWL-based ontology, play a critical role in acquiring, representing and processing information about human health. With increasing adoption and relevance, biomedical ontologies have also significantly increased in size. For example, the 11th revision of the ICD, which is currently under active development by the WHO contains nearly 50,000 classes representing a vast variety of different diseases and causes of death. This evolution in terms of size was accompanied by an evolution in the way ontologies are engineered. Because no single individual has the expertise to develop such large-scale ontologies, ontology-engineering projects have evolved from small-scale efforts involving just a few domain experts to large-scale projects that require effective collaboration between dozens or even hundreds of experts, practitioners and other stakeholders. Understanding how these stakeholders collaborate will enable us to improve editing environments that support such collaborations. We uncover how large ontology-engineering projects, such as the ICD in its 11th revision, unfold by analyzing usage logs of five different biomedical ontology-engineering projects of varying sizes and scopes using Markov chains. We discover intriguing interaction patterns (e.g., which properties users subsequently change) that suggest that large collaborative ontology-engineering projects are governed by a few general principles that determine and drive development. From our analysis, we identify commonalities and differences between different projects that have implications for project managers, ontology editors, developers and contributors working on collaborative ontology-engineering projects and tools in the biomedical domain.

preprint2016arXiv

How to Apply Markov Chains for Modeling Sequential Edit Patterns in Collaborative Ontology-Engineering Projects

With the growing popularity of large-scale collaborative ontology-engineering projects, such as the creation of the 11th revision of the International Classification of Diseases, we need new methods and insights to help project- and community-managers to cope with the constantly growing complexity of such projects. In this paper, we present a novel application of Markov chains to model sequential usage patterns that can be found in the change-logs of collaborative ontology-engineering projects. We provide a detailed presentation of the analysis process, describing all the required steps that are necessary to apply and determine the best fitting Markov chain model. Amongst others, the model and results allow us to identify structural properties and regularities as well as predict future actions based on usage sequences. We are specifically interested in determining the appropriate Markov chain orders which postulate on how many previous actions future ones depend on. To demonstrate the practical usefulness of the extracted Markov chains we conduct sequential pattern analyses on a large-scale collaborative ontology-engineering dataset, the International Classification of Diseases in its 11th revision. To further expand on the usefulness of the presented analysis, we show that the collected sequential patterns provide potentially actionable information for user-interface designers, ontology-engineering tool developers and project-managers to monitor, coordinate and dynamically adapt to the natural development processes that occur when collaboratively engineering an ontology. We hope that presented work will spur a new line of ontology-development tools, evaluation-techniques and new insights, further taking the interactive nature of the collaborative ontology-engineering process into consideration.

preprint2015arXiv

HypTrails: A Bayesian Approach for Comparing Hypotheses About Human Trails on the Web

When users interact with the Web today, they leave sequential digital trails on a massive scale. Examples of such human trails include Web navigation, sequences of online restaurant reviews, or online music play lists. Understanding the factors that drive the production of these trails can be useful for e.g., improving underlying network structures, predicting user clicks or enhancing recommendations. In this work, we present a general approach called HypTrails for comparing a set of hypotheses about human trails on the Web, where hypotheses represent beliefs about transitions between states. Our approach utilizes Markov chain models with Bayesian inference. The main idea is to incorporate hypotheses as informative Dirichlet priors and to leverage the sensitivity of Bayes factors on the prior for comparing hypotheses with each other. For eliciting Dirichlet priors from hypotheses, we present an adaption of the so-called (trial) roulette method. We demonstrate the general mechanics and applicability of HypTrails by performing experiments with (i) synthetic trails for which we control the mechanisms that have produced them and (ii) empirical trails stemming from different domains including website navigation, business reviews and online music played. Our work expands the repertoire of methods available for studying human trails on the Web.

preprint2014arXiv

Detecting Memory and Structure in Human Navigation Patterns Using Markov Chain Models of Varying Order

One of the most frequently used models for understanding human navigation on the Web is the Markov chain model, where Web pages are represented as states and hyperlinks as probabilities of navigating from one page to another. Predominantly, human navigation on the Web has been thought to satisfy the memoryless Markov property stating that the next page a user visits only depends on her current page and not on previously visited ones. This idea has found its way in numerous applications such as Google's PageRank algorithm and others. Recently, new studies suggested that human navigation may better be modeled using higher order Markov chain models, i.e., the next page depends on a longer history of past clicks. Yet, this finding is preliminary and does not account for the higher complexity of higher order Markov chain models which is why the memoryless model is still widely used. In this work we thoroughly present a diverse array of advanced inference methods for determining the appropriate Markov chain order. We highlight strengths and weaknesses of each method and apply them for investigating memory and structure of human navigation on the Web. Our experiments reveal that the complexity of higher order models grows faster than their utility, and thus we confirm that the memoryless model represents a quite practical model for human navigation on a page level. However, when we expand our analysis to a topical level, where we abstract away from specific page transitions to transitions between topics, we find that the memoryless assumption is violated and specific regularities can be observed. We report results from experiments with two types of navigational datasets (goal-oriented vs. free form) and observe interesting structural differences that make a strong argument for more contextual studies of human navigation in future work.

preprint2014arXiv

Evolution of Reddit: From the Front Page of the Internet to a Self-referential Community?

In the past few years, Reddit -- a community-driven platform for submitting, commenting and rating links and text posts -- has grown exponentially, from a small community of users into one of the largest online communities on the Web. To the best of our knowledge, this work represents the most comprehensive longitudinal study of Reddit's evolution to date, studying both (i) how user submissions have evolved over time and (ii) how the community's allocation of attention and its perception of submissions have changed over 5 years based on an analysis of almost 60 million submissions. Our work reveals an ever-increasing diversification of topics accompanied by a simultaneous concentration towards a few selected domains both in terms of posted submissions as well as perception and attention. By and large, our investigations suggest that Reddit has transformed itself from a dedicated gateway to the Web to an increasingly self-referential community that focuses on and reinforces its own user-generated image- and textual content over external sources.

preprint2014arXiv

Of course we share! Testing Assumptions about Social Tagging Systems

Social tagging systems have established themselves as an important part in today's web and have attracted the interest from our research community in a variety of investigations. The overall vision of our community is that simply through interactions with the system, i.e., through tagging and sharing of resources, users would contribute to building useful semantic structures as well as resource indexes using uncontrolled vocabulary not only due to the easy-to-use mechanics. Henceforth, a variety of assumptions about social tagging systems have emerged, yet testing them has been difficult due to the absence of suitable data. In this work we thoroughly investigate three available assumptions - e.g., is a tagging system really social? - by examining live log data gathered from the real-world public social tagging system BibSonomy. Our empirical results indicate that while some of these assumptions hold to a certain extent, other assumptions need to be reflected and viewed in a very critical light. Our observations have implications for the design of future search and other algorithms to better reflect the actual user behavior.

preprint2013arXiv

Semantic Stability in Social Tagging Streams

One potential disadvantage of social tagging systems is that due to the lack of a centralized vocabulary, a crowd of users may never manage to reach a consensus on the description of resources (e.g., books, users or songs) on the Web. Yet, previous research has provided interesting evidence that the tag distributions of resources may become semantically stable over time as more and more users tag them. At the same time, previous work has raised an array of new questions such as: (i) How can we assess the semantic stability of social tagging systems in a robust and methodical way? (ii) Does semantic stabilization of tags vary across different social tagging systems and ultimately, (iii) what are the factors that can explain semantic stabilization in such systems? In this work we tackle these questions by (i) presenting a novel and robust method which overcomes a number of limitations in existing methods, (ii) empirically investigating semantic stabilization processes in a wide range of social tagging systems with distinct domains and properties and (iii) detecting potential causes for semantic stabilization, specifically imitation behavior, shared background knowledge and intrinsic properties of natural language. Our results show that tagging streams which are generated by a combination of imitation dynamics and shared background knowledge exhibit faster and higher semantic stability than tagging streams which are generated via imitation dynamics or natural language streams alone.