Researcher profile

Matthew Choi

Matthew Choi contributes to research discovery and scholarly infrastructure.

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Published work

2 published item(s)

preprint2026arXiv

TriALS: Triphasic-Aided Liver Lesion Segmentation Benchmark in Non-Contrast CT

Automated segmentation of liver lesions on non-contrast computed tomography (NCCT) is clinically important but fundamentally challenging, particularly in low-resource settings across Africa and Asia where contrast agents are frequently unavailable. Progress has been limited by the absence of annotated NCCT benchmarks. Here we describe the TriALS challenge for automated liver lesion segmentation under contrast-limited conditions, supported by a multi-centre dataset of 150 cases with four-phase CT acquisitions (600 volumes) from Egyptian and Chinese institutions. Algorithms were evaluated on 70 cases from three institutions, including an independent external cohort. The top-performing method achieved a mean venous-phase Dice of 0.754, consistent with human-level performance, yet dropped to 0.57 on NCCT. On external validation, the leading method outperformed off-the-shelf models by up to 28% in Dice on NCCT. Algorithm performance was most strongly predicted by training data scale and pre-training strategy. A cross-year comparison exposed a persistent perceptual barrier on NCCT that scaling pre-training alone cannot overcome. Data, annotations, and code are available at https://github.com/xmed-lab/TriALS.

preprint2022arXiv

Learning quantum dynamics with latent neural ODEs

The core objective of machine-assisted scientific discovery is to learn physical laws from experimental data without prior knowledge of the systems in question. In the area of quantum physics, making progress towards these goals is significantly more challenging due to the curse of dimensionality as well as the counter-intuitive nature of quantum mechanics. Here, we present the QNODE, a latent neural ODE trained on expectation values of closed and open quantum systems dynamics. It can learn to generate such measurement data and extrapolate outside of its training region that satisfies the von Neumann and time-local Lindblad master equations for closed and open quantum systems respectively in an unsupervised means. Furthermore, the QNODE rediscovers quantum mechanical laws such as the Heisenberg's uncertainty principle in a data-driven way, without any constraint or guidance. Additionally, we show that trajectories that are generated from the QNODE that are close in its latent space have similar quantum dynamics while preserving the physics of the training system.