Researcher profile

Jens Lehmann

Jens Lehmann contributes to research discovery and scholarly infrastructure.

ResearcherAffiliation not importedOpen to collaborate

Trust snapshot

Quick read

Trust 21 - EmergingVerification L1Unclaimed author
25works
0followers
8topics
4close collaborators

Actions

Decide how to stay connected

Follow researcher0

Identity and collaboration

How to connect with this researcher

Claiming links this public author record to a researcher profile and unlocks direct collaboration workflows.

Log in to claim

Direct collaboration

Open a focused conversation when the fit is right

Claim this author entity first to unlock direct invitations.

Research graph

See the researcher in context

Open full explorer

Inspect adjacent work, topics, institutions and collaborators without jumping out to a separate graph page.

Building this graph slice

BZPEER is loading the nearby papers, people, topics and institutions for this page.

Published work

25 published item(s)

preprint2026arXiv

Advancing Safe Mechanical Ventilation Using Offline RL With Hybrid Actions and Clinically Aligned Rewards

Invasive mechanical ventilation (MV) is a life-sustaining therapy commonly used in the intensive care unit (ICU) for patients with severe and acute conditions. These patients frequently rely on MV for breathing. Given the high risk of death in such cases, optimal MV settings can reduce mortality, minimize ventilator-induced lung injury, shorten ICU stays, and ease the strain on healthcare resources. However, optimizing MV settings remains a complex and error-prone process due to patient-specific variability. While Offline Reinforcement Learning (RL) shows promise for optimizing MV settings, current methods struggle with the hybrid (continuous and discrete) nature of MV settings. Discretizing continuous settings leads to exponential growth in the action space, which limits the number of optimizable settings. Converting the predictions back to continuous can cause a distribution shift, compromising safety and performance. To address this challenge, in the IntelliLung project, we are developing an AI-based approach where we constrain the action space and employ factored action critics. This approach allows us to scale to six optimizable settings compared to 2-3 in previous studies. We adapt SOTA offline RL algorithms to operate directly on hybrid action spaces, avoiding the pitfalls of discretization. We also introduce a clinically grounded reward function based on ventilator-free days and physiological targets. Using multiobjective optimization for reward selection, we show that this leads to a more equitable consideration of all clinically relevant objectives. Notably, we develop a system in close collaboration with healthcare professionals that is aligned with real-world clinical objectives and designed with future deployment in mind.

preprint2026arXiv

Graphlets as Building Blocks for Structural Vocabulary in Knowledge Graph Foundation Models

Foundation models excel at language, where sentences become tokens, and vision, where images become pixels, because both reduce to discrete symbols on a shared, fixed grid. Knowledge Graphs share the discreteness, but not the geometry. Their entities and relations are discrete symbols, yet their arrangement is relational and lacks a common, fixed grid. Knowledge Graphs (KGs) share the discreteness, but not the geometry. They form irregular, non-Euclidean topologies whose local neighborhoods differ from graph to graph. Therefore, Knowledge Graph Foundation Models (KGFMs) rely on identifying structural invariances to produce transferable representations. Without a universal token set, KGFMs are limited in their ability to transfer representations across unseen KGs. We close this gap by treating graphlets, small connected graphs, as structural tokens that recur in heterogeneous KGs. In this paper, We introduce a model-agnostic framework based on a vocabulary of graphlets that mines a KG between relations via pattern matching. In particular, we considered closed and open 2- and 3-path, and star graphlets, to obtain robust invariances. The framework is evaluated on 51 KGs from a wide range of domains, for zero-shot inductive and transductive link prediction. Experiments show that adding simple graphlets to the vocabulary yields models that outperform prior KGFMs.

preprint2022arXiv

An Answer Verbalization Dataset for Conversational Question Answerings over Knowledge Graphs

We introduce a new dataset for conversational question answering over Knowledge Graphs (KGs) with verbalized answers. Question answering over KGs is currently focused on answer generation for single-turn questions (KGQA) or multiple-tun conversational question answering (ConvQA). However, in a real-world scenario (e.g., voice assistants such as Siri, Alexa, and Google Assistant), users prefer verbalized answers. This paper contributes to the state-of-the-art by extending an existing ConvQA dataset with multiple paraphrased verbalized answers. We perform experiments with five sequence-to-sequence models on generating answer responses while maintaining grammatical correctness. We additionally perform an error analysis that details the rates of models' mispredictions in specified categories. Our proposed dataset extended with answer verbalization is publicly available with detailed documentation on its usage for wider utility.

preprint2022arXiv

DialoKG: Knowledge-Structure Aware Task-Oriented Dialogue Generation

Task-oriented dialogue generation is challenging since the underlying knowledge is often dynamic and effectively incorporating knowledge into the learning process is hard. It is particularly challenging to generate both human-like and informative responses in this setting. Recent research primarily focused on various knowledge distillation methods where the underlying relationship between the facts in a knowledge base is not effectively captured. In this paper, we go one step further and demonstrate how the structural information of a knowledge graph can improve the system's inference capabilities. Specifically, we propose DialoKG, a novel task-oriented dialogue system that effectively incorporates knowledge into a language model. Our proposed system views relational knowledge as a knowledge graph and introduces (1) a structure-aware knowledge embedding technique, and (2) a knowledge graph-weighted attention masking strategy to facilitate the system selecting relevant information during the dialogue generation. An empirical evaluation demonstrates the effectiveness of DialoKG over state-of-the-art methods on several standard benchmark datasets.

preprint2022arXiv

Geometric Algebra based Embeddings for Static and Temporal Knowledge Graph Completion

Recent years, Knowledge Graph Embeddings (KGEs) have shown promising performance on link prediction tasks by mapping the entities and relations from a Knowledge Graph (KG) into a geometric space and thus have gained increasing attentions. In addition, many recent Knowledge Graphs involve evolving data, e.g., the fact (\textit{Obama}, \textit{PresidentOf}, \textit{USA}) is valid only from 2009 to 2017. This introduces important challenges for knowledge representation learning since such temporal KGs change over time. In this work, we strive to move beyond the complex or hypercomplex space for KGE and propose a novel geometric algebra based embedding approach, GeomE, which uses multivector representations and the geometric product to model entities and relations. GeomE subsumes several state-of-the-art KGE models and is able to model diverse relations patterns. On top of this, we extend GeomE to TGeomE for temporal KGE, which performs 4th-order tensor factorization of a temporal KG and devises a new linear temporal regularization for time representation learning. Moreover, we study the effect of time granularity on the performance of TGeomE models. Experimental results show that our proposed models achieve the state-of-the-art performances on link prediction over four commonly-used static KG datasets and four well-established temporal KG datasets across various metrics.

preprint2022arXiv

RoMe: A Robust Metric for Evaluating Natural Language Generation

Evaluating Natural Language Generation (NLG) systems is a challenging task. Firstly, the metric should ensure that the generated hypothesis reflects the reference's semantics. Secondly, it should consider the grammatical quality of the generated sentence. Thirdly, it should be robust enough to handle various surface forms of the generated sentence. Thus, an effective evaluation metric has to be multifaceted. In this paper, we propose an automatic evaluation metric incorporating several core aspects of natural language understanding (language competence, syntactic and semantic variation). Our proposed metric, RoMe, is trained on language features such as semantic similarity combined with tree edit distance and grammatical acceptability, using a self-supervised neural network to assess the overall quality of the generated sentence. Moreover, we perform an extensive robustness analysis of the state-of-the-art methods and RoMe. Empirical results suggest that RoMe has a stronger correlation to human judgment over state-of-the-art metrics in evaluating system-generated sentences across several NLG tasks.

preprint2022arXiv

Semantic Answer Type and Relation Prediction Task (SMART 2021)

Each year the International Semantic Web Conference organizes a set of Semantic Web Challenges to establish competitions that will advance state-of-the-art solutions in some problem domains. The Semantic Answer Type and Relation Prediction Task (SMART) task is one of the ISWC 2021 Semantic Web challenges. This is the second year of the challenge after a successful SMART 2020 at ISWC 2020. This year's version focuses on two sub-tasks that are very important to Knowledge Base Question Answering (KBQA): Answer Type Prediction and Relation Prediction. Question type and answer type prediction can play a key role in knowledge base question answering systems providing insights about the expected answer that are helpful to generate correct queries or rank the answer candidates. More concretely, given a question in natural language, the first task is, to predict the answer type using a target ontology (e.g., DBpedia or Wikidata. Similarly, the second task is to identify relations in the natural language query and link them to the relations in a target ontology. This paper discusses the task descriptions, benchmark datasets, and evaluation metrics. For more information, please visit https://smart-task.github.io/2021/.

preprint2022arXiv

Time-aware Graph Neural Networks for Entity Alignment between Temporal Knowledge Graphs

Entity alignment aims to identify equivalent entity pairs between different knowledge graphs (KGs). Recently, the availability of temporal KGs (TKGs) that contain time information created the need for reasoning over time in such TKGs. Existing embedding-based entity alignment approaches disregard time information that commonly exists in many large-scale KGs, leaving much room for improvement. In this paper, we focus on the task of aligning entity pairs between TKGs and propose a novel Time-aware Entity Alignment approach based on Graph Neural Networks (TEA-GNN). We embed entities, relations and timestamps of different KGs into a vector space and use GNNs to learn entity representations. To incorporate both relation and time information into the GNN structure of our model, we use a time-aware attention mechanism which assigns different weights to different nodes with orthogonal transformation matrices computed from embeddings of the relevant relations and timestamps in a neighborhood. Experimental results on multiple real-world TKG datasets show that our method significantly outperforms the state-of-the-art methods due to the inclusion of time information.

preprint2022arXiv

Transformer with Tree-order Encoding for Neural Program Generation

While a considerable amount of semantic parsing approaches have employed RNN architectures for code generation tasks, there have been only few attempts to investigate the applicability of Transformers for this task. Including hierarchical information of the underlying programming language syntax has proven to be effective for code generation. Since the positional encoding of the Transformer can only represent positions in a flat sequence, we have extended the encoding scheme to allow the attention mechanism to also attend over hierarchical positions in the input. Furthermore, we have realized a decoder based on a restrictive grammar graph model to improve the generation accuracy and ensure the well-formedness of the generated code. While we did not surpass the state of the art, our findings suggest that employing a tree-based positional encoding in combination with a shared natural-language subword vocabulary improves generation performance over sequential positional encodings.

preprint2021arXiv

CHOLAN: A Modular Approach for Neural Entity Linking on Wikipedia and Wikidata

In this paper, we propose CHOLAN, a modular approach to target end-to-end entity linking (EL) over knowledge bases. CHOLAN consists of a pipeline of two transformer-based models integrated sequentially to accomplish the EL task. The first transformer model identifies surface forms (entity mentions) in a given text. For each mention, a second transformer model is employed to classify the target entity among a predefined candidates list. The latter transformer is fed by an enriched context captured from the sentence (i.e. local context), and entity description gained from Wikipedia. Such external contexts have not been used in the state of the art EL approaches. Our empirical study was conducted on two well-known knowledge bases (i.e., Wikidata and Wikipedia). The empirical results suggest that CHOLAN outperforms state-of-the-art approaches on standard datasets such as CoNLL-AIDA, MSNBC, AQUAINT, ACE2004, and T-REx.

preprint2020arXiv

A Scalable Framework for Quality Assessment of RDF Datasets

Over the last years, Linked Data has grown continuously. Today, we count more than 10,000 datasets being available online following Linked Data standards. These standards allow data to be machine readable and inter-operable. Nevertheless, many applications, such as data integration, search, and interlinking, cannot take full advantage of Linked Data if it is of low quality. There exist a few approaches for the quality assessment of Linked Data, but their performance degrades with the increase in data size and quickly grows beyond the capabilities of a single machine. In this paper, we present DistQualityAssessment -- an open source implementation of quality assessment of large RDF datasets that can scale out to a cluster of machines. This is the first distributed, in-memory approach for computing different quality metrics for large RDF datasets using Apache Spark. We also provide a quality assessment pattern that can be used to generate new scalable metrics that can be applied to big data. The work presented here is integrated with the SANSA framework and has been applied to at least three use cases beyond the SANSA community. The results show that our approach is more generic, efficient, and scalable as compared to previously proposed approaches.

preprint2020arXiv

Distantly Supervised Question Parsing

The emergence of structured databases for Question Answering (QA) systems has led to developing methods, in which the problem of learning the correct answer efficiently is based on a linking task between the constituents of the question and the corresponding entries in the database. As a result, parsing the questions in order to determine their main elements, which are required for answer retrieval, becomes crucial. However, most datasets for QA systems lack gold annotations for parsing, i.e., labels are only available in the form of (question, formal-query, answer). In this paper, we propose a distantly supervised learning framework based on reinforcement learning to learn the mentions of entities and relations in questions. We leverage the provided formal queries to characterize delayed rewards for optimizing a policy gradient objective for the parsing model. An empirical evaluation of our approach shows a significant improvement in the performance of entity and relation linking compared to the state of the art. We also demonstrate that a more accurate parsing component enhances the overall performance of QA systems.

preprint2020arXiv

End-to-End Entity Linking and Disambiguation leveraging Word and Knowledge Graph Embeddings

Entity linking - connecting entity mentions in a natural language utterance to knowledge graph (KG) entities is a crucial step for question answering over KGs. It is often based on measuring the string similarity between the entity label and its mention in the question. The relation referred to in the question can help to disambiguate between entities with the same label. This can be misleading if an incorrect relation has been identified in the relation linking step. However, an incorrect relation may still be semantically similar to the relation in which the correct entity forms a triple within the KG; which could be captured by the similarity of their KG embeddings. Based on this idea, we propose the first end-to-end neural network approach that employs KG as well as word embeddings to perform joint relation and entity classification of simple questions while implicitly performing entity disambiguation with the help of a novel gating mechanism. An empirical evaluation shows that the proposed approach achieves a performance comparable to state-of-the-art entity linking while requiring less post-processing.

preprint2020arXiv

Evaluating the Impact of Knowledge Graph Context on Entity Disambiguation Models

Pretrained Transformer models have emerged as state-of-the-art approaches that learn contextual information from text to improve the performance of several NLP tasks. These models, albeit powerful, still require specialized knowledge in specific scenarios. In this paper, we argue that context derived from a knowledge graph (in our case: Wikidata) provides enough signals to inform pretrained transformer models and improve their performance for named entity disambiguation (NED) on Wikidata KG. We further hypothesize that our proposed KG context can be standardized for Wikipedia, and we evaluate the impact of KG context on state-of-the-art NED model for the Wikipedia knowledge base. Our empirical results validate that the proposed KG context can be generalized (for Wikipedia), and providing KG context in transformer architectures considerably outperforms the existing baselines, including the vanilla transformer models.

preprint2020arXiv

How Complex is your classification problem? A survey on measuring classification complexity

Characteristics extracted from the training datasets of classification problems have proven to be effective predictors in a number of meta-analyses. Among them, measures of classification complexity can be used to estimate the difficulty in separating the data points into their expected classes. Descriptors of the spatial distribution of the data and estimates of the shape and size of the decision boundary are among the known measures for this characterization. This information can support the formulation of new data-driven pre-processing and pattern recognition techniques, which can in turn be focused on challenges highlighted by such characteristics of the problems. This paper surveys and analyzes measures which can be extracted from the training datasets in order to characterize the complexity of the respective classification problems. Their use in recent literature is also reviewed and discussed, allowing to prospect opportunities for future work in the area. Finally, descriptions are given on an R package named Extended Complexity Library (ECoL) that implements a set of complexity measures and is made publicly available.

preprint2020arXiv

Improving the Long-Range Performance of Gated Graph Neural Networks

Many popular variants of graph neural networks (GNNs) that are capable of handling multi-relational graphs may suffer from vanishing gradients. In this work, we propose a novel GNN architecture based on the Gated Graph Neural Network with an improved ability to handle long-range dependencies in multi-relational graphs. An experimental analysis on different synthetic tasks demonstrates that the proposed architecture outperforms several popular GNN models.

preprint2020arXiv

Incorporating Joint Embeddings into Goal-Oriented Dialogues with Multi-Task Learning

Attention-based encoder-decoder neural network models have recently shown promising results in goal-oriented dialogue systems. However, these models struggle to reason over and incorporate state-full knowledge while preserving their end-to-end text generation functionality. Since such models can greatly benefit from user intent and knowledge graph integration, in this paper we propose an RNN-based end-to-end encoder-decoder architecture which is trained with joint embeddings of the knowledge graph and the corpus as input. The model provides an additional integration of user intent along with text generation, trained with a multi-task learning paradigm along with an additional regularization technique to penalize generating the wrong entity as output. The model further incorporates a Knowledge Graph entity lookup during inference to guarantee the generated output is state-full based on the local knowledge graph provided. We finally evaluated the model using the BLEU score, empirical evaluation depicts that our proposed architecture can aid in the betterment of task-oriented dialogue system`s performance.

preprint2020arXiv

IQA: Interactive Query Construction in Semantic Question Answering Systems

Semantic Question Answering (SQA) systems automatically interpret user questions expressed in a natural language in terms of semantic queries. This process involves uncertainty, such that the resulting queries do not always accurately match the user intent, especially for more complex and less common questions. In this article, we aim to empower users in guiding SQA systems towards the intended semantic queries through interaction. We introduce IQA - an interaction scheme for SQA pipelines. This scheme facilitates seamless integration of user feedback in the question answering process and relies on Option Gain - a novel metric that enables efficient and intuitive user interaction. Our evaluation shows that using the proposed scheme, even a small number of user interactions can lead to significant improvements in the performance of SQA systems.

preprint2020arXiv

Linking Physicians to Medical Research Results via Knowledge Graph Embeddings and Twitter

Informing professionals about the latest research results in their field is a particularly important task in the field of health care, since any development in this field directly improves the health status of the patients. Meanwhile, social media is an infrastructure that allows public instant sharing of information, thus it has recently become popular in medical applications. In this study, we apply Multi Distance Knowledge Graph Embeddings (MDE) to link physicians and surgeons to the latest medical breakthroughs that are shared as the research results on Twitter. Our study shows that using this method physicians can be informed about the new findings in their field given that they have an account dedicated to their profession.

preprint2020arXiv

MDE: Multiple Distance Embeddings for Link Prediction in Knowledge Graphs

Over the past decade, knowledge graphs became popular for capturing structured domain knowledge. Relational learning models enable the prediction of missing links inside knowledge graphs. More specifically, latent distance approaches model the relationships among entities via a distance between latent representations. Translating embedding models (e.g., TransE) are among the most popular latent distance approaches which use one distance function to learn multiple relation patterns. However, they are mostly inefficient in capturing symmetric relations since the representation vector norm for all the symmetric relations becomes equal to zero. They also lose information when learning relations with reflexive patterns since they become symmetric and transitive. We propose the Multiple Distance Embedding model (MDE) that addresses these limitations and a framework to collaboratively combine variant latent distance-based terms. Our solution is based on two principles: 1) we use a limit-based loss instead of a margin ranking loss and, 2) by learning independent embedding vectors for each of the terms we can collectively train and predict using contradicting distance terms. We further demonstrate that MDE allows modeling relations with (anti)symmetry, inversion, and composition patterns. We propose MDE as a neural network model that allows us to map non-linear relations between the embedding vectors and the expected output of the score function. Our empirical results show that MDE performs competitively to state-of-the-art embedding models on several benchmark datasets.

preprint2020arXiv

No One is Perfect: Analysing the Performance of Question Answering Components over the DBpedia Knowledge Graph

Question answering (QA) over knowledge graphs has gained significant momentum over the past five years due to the increasing availability of large knowledge graphs and the rising importance of question answering for user interaction. DBpedia has been the most prominently used knowledge graph in this setting and most approaches currently use a pipeline of processing steps connecting a sequence of components. In this article, we analyse and micro evaluate the behaviour of 29 available QA components for DBpedia knowledge graph that were released by the research community since 2010. As a result, we provide a perspective on collective failure cases, suggest characteristics of QA components that prevent them from performing better and provide future challenges and research directions for the field.

preprint2020arXiv

PNEL: Pointer Network based End-To-End Entity Linking over Knowledge Graphs

Question Answering systems are generally modelled as a pipeline consisting of a sequence of steps. In such a pipeline, Entity Linking (EL) is often the first step. Several EL models first perform span detection and then entity disambiguation. In such models errors from the span detection phase cascade to later steps and result in a drop of overall accuracy. Moreover, lack of gold entity spans in training data is a limiting factor for span detector training. Hence the movement towards end-to-end EL models began where no separate span detection step is involved. In this work we present a novel approach to end-to-end EL by applying the popular Pointer Network model, which achieves competitive performance. We demonstrate this in our evaluation over three datasets on the Wikidata Knowledge Graph.

preprint2020arXiv

PyKEEN 1.0: A Python Library for Training and Evaluating Knowledge Graph Embeddings

Recently, knowledge graph embeddings (KGEs) received significant attention, and several software libraries have been developed for training and evaluating KGEs. While each of them addresses specific needs, we re-designed and re-implemented PyKEEN, one of the first KGE libraries, in a community effort. PyKEEN 1.0 enables users to compose knowledge graph embedding models (KGEMs) based on a wide range of interaction models, training approaches, loss functions, and permits the explicit modeling of inverse relations. Besides, an automatic memory optimization has been realized in order to exploit the provided hardware optimally, and through the integration of Optuna extensive hyper-parameter optimization (HPO) functionalities are provided.

preprint2020arXiv

Unveiling Relations in the Industry 4.0 Standards Landscape based on Knowledge Graph Embeddings

Industry~4.0 (I4.0) standards and standardization frameworks have been proposed with the goal of \emph{empowering interoperability} in smart factories. These standards enable the description and interaction of the main components, systems, and processes inside of a smart factory. Due to the growing number of frameworks and standards, there is an increasing need for approaches that automatically analyze the landscape of I4.0 standards. Standardization frameworks classify standards according to their functions into layers and dimensions. However, similar standards can be classified differently across the frameworks, producing, thus, interoperability conflicts among them. Semantic-based approaches that rely on ontologies and knowledge graphs, have been proposed to represent standards, known relations among them, as well as their classification according to existing frameworks. Albeit informative, the structured modeling of the I4.0 landscape only provides the foundations for detecting interoperability issues. Thus, graph-based analytical methods able to exploit knowledge encoded by these approaches, are required to uncover alignments among standards. We study the relatedness among standards and frameworks based on community analysis to discover knowledge that helps to cope with interoperability conflicts between standards. We use knowledge graph embeddings to automatically create these communities exploiting the meaning of the existing relationships. In particular, we focus on the identification of similar standards, i.e., communities of standards, and analyze their properties to detect unknown relations. We empirically evaluate our approach on a knowledge graph of I4.0 standards using the Trans$^*$ family of embedding models for knowledge graph entities. Our results are promising and suggest that relations among standards can be detected accurately.

preprint2019arXiv

Open-domain Event Extraction and Embedding for Natural Gas Market Prediction

We propose an approach to predict the natural gas price in several days using historical price data and events extracted from news headlines. Most previous methods treats price as an extrapolatable time series, those analyze the relation between prices and news either trim their price data correspondingly to a public news dataset, manually annotate headlines or use off-the-shelf tools. In comparison to off-the-shelf tools, our event extraction method detects not only the occurrence of phenomena but also the changes in attribution and characteristics from public sources. Instead of using sentence embedding as a feature, we use every word of the extracted events, encode and organize them before feeding to the learning models. Empirical results show favorable results, in terms of prediction performance, money saved and scalability.