Researcher profile

Hyunju Lee

Hyunju Lee contributes to research discovery and scholarly infrastructure.

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Published work

3 published item(s)

preprint2026arXiv

TAS-LoRA: Transformer Architecture Search with Mixture-of-LoRA Experts

Transformer architecture search (TAS) discovers optimal vision transformer (ViT) architectures automatically, reducing human effort to manually design ViTs. However, existing TAS methods suffer from the feature collapse problem, where subnets within a supernet fail to learn subnet-specific features, mainly due to the shared weights in a supernet, limiting the performance of individual subnets. To address this, we propose TAS-LoRA, a novel method that introduces parameter-efficient low-rank adaptation (LoRA) to enable subnet-specific feature learning, while maintaining computational efficiency. TAS-LoRA incorporates a Mixture-of-LoRAExperts (MoLE) strategy, where a lightweight router dynamically assigns LoRA experts based on subnet architectures, and introduces a group-wise router initialization technique to encourage diverse feature learning across experts early in training. Extensive experiments on ImageNet and several transfer learning benchmarks, including CIFAR-10/100, Flowers, CARS, and INAT-19, demonstrate that TAS-LoRA mitigates feature collapse effectively, improving performance over state-of-the-art TAS methods significantly.

preprint2022arXiv

SDGCCA: Supervised Deep Generalized Canonical Correlation Analysis for Multi-omics Integration

Integration of multi-omics data provides opportunities for revealing biological mechanisms related to certain phenotypes. We propose a novel method of multi-omics integration called supervised deep generalized canonical correlation analysis (SDGCCA) for modeling correlation structures between nonlinear multi-omics manifolds, aiming for improving classification of phenotypes and revealing biomarkers related to phenotypes. SDGCCA addresses the limitations of other canonical correlation analysis (CCA)-based models (e.g., deep CCA, deep generalized CCA) by considering complex/nonlinear cross-data correlations and discriminating phenotype groups. Although there are a few methods for nonlinear CCA projections for discriminant purposes of phenotypes, they only consider two views. On the other hand, SDGCCA is the nonlinear multiview CCA projection method for discrimination. When we applied SDGCCA to prediction of patients of Alzheimer's disease (AD) and discrimination of early- and late-stage cancers, it outperformed other CCA-based methods and other supervised methods. In addition, we demonstrate that SDGCCA can be used for feature selection to identify important multi-omics biomarkers. In the application on AD data, SDGCCA identified clusters of genes in multi-omics data, which are well known to be associated with AD.

preprint2020arXiv

Two Segmentation Methods for the Diagnosis of Malignant Melanoma

Automatic diagnosis of malignant melanoma highly depends on the segmentation methods used for the suspicious lesion. We suggest the parameter selection method (PSM) and maximum area method (MAM) for the segmentation of the lesion to be diagnosed. Herein, these segmentation methods are compared to a skin cancer expert's segmentation and three other conventional algorithms. The diagnosis of malignant melanoma based on the two suggested, three conventional, and expert's segmentation are compared with respect to sensitivity, specificity, and accuracy.