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Gionni Marchetti

Gionni Marchetti contributes to research discovery and scholarly infrastructure.

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Published work

4 published item(s)

preprint2026arXiv

Beyond Explained Variance: A Cautionary Tale of PCA

We address shortcomings of principal component analysis (PCA) for visualizing high-dimensional data lying on a nonlinear low-dimensional manifold via two-dimensional scatterplots, focusing on a fossil teeth dataset from the early mammalian insectivore Kuehneotherium. While the PCA scatterplot reported by Jolliffe and Cadima (Philosophical Transactions of the Royal Society A, 2016) shows clustering in the region where PC2 < 0, our analysis based on t-SNE and persistent homology (PH) reveals a ring-like structure with no evident clustering and intrinsic dimensionality equal to one. We further propose a generative probabilistic-geometric model in which the data are sampled uniformly from a unit circle. Under this model, pairwise cosine distances follow an arcsine distribution, in qualitative agreement with the observed U-shaped distribution, thereby independently supporting the analysis based on t-SNE and persistent homology.

preprint2022arXiv

Machine Learning S-Wave Scattering Phase Shifts Bypassing the Radial Schrödinger Equation

We present a proof of concept machine learning model resting on a convolutional neural network capable to yield accurate scattering s-wave phase shifts caused by different three-dimensional spherically symmetric potentials at fixed collision energy thereby bypassing the radial Schrödinger equation. In out work, we discuss how the Hamiltonian can serve as a guiding principle in the construction of a physically-motivated descriptor. The good performance, even in presence of bound states in the data sets, exhibited by our model that accordingly is trained on the Hamiltonian through each scattering potential, demonstrates the feasibility of this proof of principle.

preprint2020arXiv

A Bird&#39;s-Eye View of Naming Game Dynamics: From Trait Competition to Bayesian Inference

The present contribution reviews a set of different versions of the basic naming game model, differing in the underlying topology or in the mechanisms regulating the interactions between agents. We include also a Bayesian naming game model recently introduced, which merges the social dynamics of the basic naming game model with the Bayesian learning framework introduced by Tenenbaum and co-workers. The latter model goes beyond the fixed nature of names and concepts of standard semiotic dynamics models and the corresponding one-shot learning process, by describing dynamically how agents can generalize a concept from a few examples, according to principles of Bayesian inference.

preprint2019arXiv

A Bayesian Approach to the Naming Game Model

We present a novel Bayesian approach to semiotic dynamics, which is a cognitive analogue of the naming game model restricted to two conventions. The one-shot learning that characterizes the agent dynamics in the basic naming game is replaced by a word-learning process, in which agents learn a new word by generalizing from the evidence garnered through pairwise-interactions with other agents. The principle underlying the model is that agents, like humans, can learn from a few positive examples and that such a process is modeled in a Bayesian probabilistic framework. We show that the model presents some analogies but also crucial differences with respect to the dynamics of the basic two-convention naming game model. The model introduced aims at providing a starting point for the construction of a general framework for studying the combined effects of cognitive and social dynamics.