Source author record

Deok-Sun Lee

Deok-Sun Lee appears in the imported research catalog. Authorship, coauthor and topic links are available while profile ownership is still unclaimed.

ResearcherUnclaimed source record

Catalog footprint

What is connected

11works
10topics
4close collaborators

Actions

Connect this record

Log in to claim

Research graph

See the researcher in context

Open full explorer

Inspect adjacent papers, topics, institutions and collaborators without losing the researcher page.

Building this map preview

BZPEER is loading the nearby papers, people, topics and institutions for this page.

Published work

11 published item(s)

preprint2026arXiv

Watch your neighbors: Training statistically accurate chaotic systems with local phase space information

Chaotic systems pose fundamental challenges for data-driven dynamics discovery, as small modeling errors lead to exponentially growing trajectory discrepancies. Since exact long-term prediction is unattainable, it is natural to ask what a good surrogate model for chaotic dynamics is. Prior work has largely focused either on reproducing the Jacobian of the underlying dynamics, which governs local expansion and contraction rates, or on training surrogate models that reproduce the ground-truth dynamics' long-term statistical behavior. In this work, we propose a new framework that aims to bridge these two paradigms by training surrogate dynamics models with accurate Jacobians and long-term statistical properties. Our method constructs a local covering of a chaotic attractor in phase space and analyzes the expansion and contraction of these coverings under the dynamics. The surrogate model is trained by minimizing the maximum mean discrepancy between the pushforward distributions of the coverings under the surrogate and ground-truth dynamics. Experiments show that our method significantly improves Jacobian accuracy while remaining competitive with state-of-the-art statistically accurate dynamics learning methods. Our code is fully available at https://anonymous.4open.science/r/neighborwatch.

preprint2024arXiv

Correlation-enhanced viable core in metabolic networks

Cellular ingredient concentrations can be stabilized by adjusting generation and consumption rates through multiple pathways. To explore the portion of cellular metabolism equipped with multiple pathways, we categorize individual metabolic reactions and compounds as viable or inviable: A compound is viable if processed by two or more reactions, and a reaction is viable if all of its substrates and products are viable. Using this classification, we identify the maximal subnetwork of viable nodes, referred to as the {\it viable core}, in bipartite metabolic networks across thousands of species. The obtained viable cores are remarkably larger than those in degree-preserving randomized networks, while their broad degree distributions commonly enable the viable cores to shrink gradually as reaction nodes are deleted. We demonstrate that the positive degree-degree correlations of the empirical networks may underlie the enlarged viable cores compared to the randomized networks. By investigating the relation between degree and cross-species frequency of metabolic compounds and reactions, we elucidate the evolutionary origin of the correlations.

preprint2024arXiv

Heterogeneous popularity of metabolic reactions from evolution

The composition of cellular metabolism is different across species. Empirical data reveal that bacterial species contain similar numbers of metabolic reactions but that the cross-species popularity of reactions is so heterogenous that some reactions are found in all the species while others are in just few species, characterized by a power-law distribution with the exponent one. Introducing an evolutionary model concretizing the stochastic recruitment of chemical reactions into the metabolism of different species at different times and their inheritance to descendants, we demonstrate that the exponential growth of the number of species containing a reaction and the saturated recruitment rate of brand-new reactions lead to the empirically identified power-law popularity distribution. Furthermore, the structural characteristics of metabolic networks and the species' phylogeny in our simulations agree well with empirical observations.

preprint2024arXiv

Scaling in local to global condensation of wealth on sparse networks

The prevalence of wealth inequality propels us to characterize its origin and progression, via empirical and theoretical studies. The Yard-Sale(YS) model, in which a portion of the smaller wealth is transferred between two individuals, culminates in the concentration of almost all wealth to a single individual, while distributing rest of the wealth with a power-law of exponent one. By incorporating redistribution to the model, in which the transferred wealth is proportional to the sender's wealth, we show that such extreme inequality is suppressed if the frequency ratio of redistribution to the YS-type exchange exceeds the inverse of the population size. Studying our model on a sparsely-connected population, we find that the wealth inequality ceases to grow for a period, when local rich nodes can no longer acquire wealth from their broke nearest neighbors. Subsequently, inequality resumes growth due to the redistribution effect by allowing locally amassed wealth to move and coalesce. Analyzing the Langevin equations and the coalescing random walk on complex networks, we elucidate the scaling behaviors of wealth inequality in those multiple phases. These findings reveal the influence of network structure on wealth distribution, offering a novel perspective on wealth inequality.

preprint2022arXiv

Stability and selective extinction in complex mutualistic networks

We study species abundance in the empirical plant-pollinator mutualistic networks exhibiting broad degree distributions, with uniform intra-group competition assumed, by the Lotka-Volterra equation. The stability of a fixed point is found to be identified by the signs of its non-zero components and those of its neighboring fixed points. Taking the annealed approximation, we derive the non-zero components to be formulated in terms of degrees and the rescaled interaction strengths, which lead us to find different stable fixed points depending on parameters, and we obtain the phase diagram. The selective extinction phase finds small-degree species extinct and effective interaction reduced, maintaining stability and hindering the onset of instability. The non-zero minimum species abundances from different empirical networks show data collapse when rescaled as predicted theoretically.

preprint2020arXiv

Optimizing hospital distribution across districts for reducing tuberculosis fatalities

The spatial distributions of diverse facilities are often understood in terms of the optimization of the commute distance or the economic profit. Incorporating more general objective functions into such optimization framework may be useful, helping the policy decisions to meet various social and economic demands. As an example, we consider how hospitals should be distributed to minimize the total fatalities of tuberculosis (TB). The empirical data of Korea shows that the fatality rate of TB in a district decreases with the areal density of hospitals, implying their correlation and the possibility of reducing the nationwide fatalities by adjusting the hospital distribution across districts. Approximating the fatality rate by the probability of a patient not to visit a hospital in her/his residential district for the duration period of TB and evaluating the latter probability in the random-walk framework, we obtain the fatality rate as an exponential function of the hospital density with a characteristic constant related to each district's effective lattice constant estimable empirically. This leads us to the optimal hospital distribution which finds the hospital density in a district to be a logarithmic function of the rescaled patient density. The total fatalities is reduced by 13\% with this optimum. The current hospital density deviates from the optimized one in different manners from district to district, which is analyzed in the proposed model framework. The assumptions and limitations of our study are also discussed.

preprint2016arXiv

The Eigenmode Analysis of Human Motion

Rapid advances in modern communication technology are enabling the accumulation of large-scale, high-resolution observational data of spatiotemporal movements of humans. Classification and prediction of human mobility based on the analysis of such data carry great potential in applications such as urban planning as well as being of theoretical interest. A robust theoretical framework is therefore required to study and properly understand human motion. Here we perform the eigenmode analysis of human motion data gathered from mobile communication records, which allows us to explore the scaling properties and characteristics of human motion.

preprint2014arXiv

Evolution of regulatory networks towards adaptability and stability in a changing environment

Diverse biological networks exhibit universal features distinguished from those of random networks, calling much attention to their origins and implications. Here we propose a minimal evolution model of Boolean regulatory networks, which evolve by selectively rewiring links towards enhancing adaptability to a changing environment and stability against dynamical perturbations. We find that sparse and heterogeneous connectivity patterns emerge, which show qualitative agreement with real transcriptional regulatory networks and metabolic networks. The characteristic scaling behavior of stability reflects the balance between robustness and flexibility. The scaling of fluctuation in the perturbation spread shows a dynamic crossover, which is analyzed by investigating separately the stochasticity of internal dynamics and the network structures different depending on the evolution pathways. Our study delineates how the ambivalent pressure of evolution shapes biological networks, which can be helpful for studying general complex systems interacting with environments.

preprint2014arXiv

Lattice Model for Spontaneous Imbibition in Porous Media: The Role of Effective Tension and Universality Class

Recently anomalous scaling properties of front broadening during spontaneous imbibition of water in Vycor glass, a nano-porous medium, were reported: the mean height and the width of the propagating front increase with time $t$ both proportional to $t^{1/2}$. Here we propose a simple lattice imbibition model and elucidate quantitatively how the correlation range of the hydrostatic pressure and the disorder strength of the pore radii affect the scaling properties of the imbibition front. We introduce an effective tension of liquid across neighboring pores, which depends on the aspect ratio of each pore, and show that it leads to a dynamical crossover: both the mean height and the roughness grow faster in the presence of tension in the intermediate-time regime but eventually saturate in the long-time regime. The universality class of the long-time behavior is discussed by examining the associated scaling exponents and their relation to directed percolation.

preprint2012arXiv

Interspecific competition underlying mutualistic networks

The architecture of bipartite networks linking two classes of constituents is affected by the interactions within each class. For the bipartite networks representing the mutualistic relationship between pollinating animals and plants, it has been known that their degree distributions are broad but often deviate from power-law form, more significantly for plants than animals. Here we consider a model for the evolution of the mutualistic networks and find that their topology is strongly dependent on the asymmetry and non-linearity of the preferential selection of mutualistic partners. Real-world mutualistic networks analyzed in the framework of the model show that a new animal species determines its partners not only by their attractiveness but also as a result of the competition with pre-existing animals, which leads to the stretched-exponential degree distributions of plant species.

preprint2012arXiv

Scaling of nestedness in complex networks

Nestedness characterizes the linkage pattern of networked systems, indicating the likelihood that a node is linked to the nodes linked to the nodes with larger degrees than it. Networks of mutualistic relationship between distinct groups of species in ecological communities exhibit such nestedness, which is known to support the network robustness. Despite such importance, quantitative characteristics of nestedness is little understood. Here we take graph-theoretic approach to derive the scaling properties of nestedness in various model networks. Our results show how the heterogeneous connectivity patterns enhance nestedness. Also we find that the nestedness of bipartite networks depend sensitively on the fraction of different types of nodes, causing nestedness to scale differently for nodes of different types.