Researcher profile

Christopher D. Manning

Christopher D. Manning contributes to research discovery and scholarly infrastructure.

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Published work

15 published item(s)

preprint2026arXiv

SecureForge: Finding and Preventing Vulnerabilities in LLM-Generated Code via Prompt Optimization

LLM coding agents now generate code at an unprecedented scale, yet LLM-generated code introduces cybersecurity vulnerabilities into codebases without human involvement. Even when frontier models are explicitly asked to write secure production code with relevant weaknesses to avoid in context, we find that they still produce verifiable vulnerabilities on average 23% of the time across a corpus of 250 benign coding prompts. We introduce SecureForge, an automated pipeline that both audits security risks of frontier models and produces auditing-informed secure system prompts that reduce output security vulnerabilities while maintaining unit test performance. SecureForge first identifies benign prompts that produce statically detectable vulnerabilities, and then amplifies them into a large synthetic prompt corpus of diverse scenarios using a Markovian sampling technique to jointly maintain error rates and prompt diversity. This corpus is then used to iteratively optimize the system prompts to reduce output security vulnerabilities. On frontier models, SecureForge yields a statistically significant Pareto improvement in both unit test success and output security, with output vulnerabilities reduced by up to 48%. The resulting system prompts transfer zero-shot to in-the-wild coding agent prompts, without any exposure to real user prompt distributions during optimization.

preprint2026arXiv

Shepherd: A Runtime Substrate Empowering Meta-Agents with a Formalized Execution Trace

We introduce Shepherd, a functional programming model that formalizes meta-agent operations on target agents as functions, with core operations mechanized in Lean. Shepherd records every agent-environment interaction as a typed event in a Git-like execution trace, enabling any past state to be forked and replayed. The system forks the agent process and its filesystem $5\times$ faster than Docker, achieving $>95\%$ prompt-cache reuse on replay. We demonstrate the model through three applications. First, in runtime intervention, a live supervisor increases pair coding pass rates from 28.8% to 54.7% on CooperBench. Second, in counterfactual meta-optimization, branching exploration outperforms baselines across four benchmarks by up to 11 points while reducing wall-clock time by up to 58%. Third, in Tree-RL training, forking rollouts at selected turns improves TerminalBench-2 performance from 34.2% to 39.4%. These results establish Shepherd as an efficient infrastructure for programming meta-agents. We open-source the system to support future research.

preprint2026arXiv

Stronger Baselines for Retrieval-Augmented Generation with Long-Context Language Models

With the rise of long-context language models (LMs) capable of processing tens of thousands of tokens in a single context window, do multi-stage retrieval-augmented generation (RAG) pipelines still offer measurable benefits over simpler, single-stage approaches? To assess this question, we conduct a controlled evaluation for QA tasks under systematically scaled token budgets, comparing two recent multi-stage pipelines, ReadAgent and RAPTOR, against three baselines, including DOS RAG (Document's Original Structure RAG), a simple retrieve-then-read method that preserves original passage order. Despite its straightforward design, DOS RAG consistently matches or outperforms more intricate methods on multiple long-context QA benchmarks. We trace this strength to a combination of maintaining source fidelity and document structure, prioritizing recall within effective context windows, and favoring simplicity over added pipeline complexity. We recommend establishing DOS RAG as a simple yet strong baseline for future RAG evaluations, paired with state-of-the-art embedding and language models, and benchmarked under matched token budgets, to ensure that added pipeline complexity is justified by clear performance gains as models continue to improve.

preprint2023arXiv

Neural Generation Meets Real People: Building a Social, Informative Open-Domain Dialogue Agent

We present Chirpy Cardinal, an open-domain social chatbot. Aiming to be both informative and conversational, our bot chats with users in an authentic, emotionally intelligent way. By integrating controlled neural generation with scaffolded, hand-written dialogue, we let both the user and bot take turns driving the conversation, producing an engaging and socially fluent experience. Deployed in the fourth iteration of the Alexa Prize Socialbot Grand Challenge, Chirpy Cardinal handled thousands of conversations per day, placing second out of nine bots with an average user rating of 3.58/5.

preprint2022arXiv

GreaseLM: Graph REASoning Enhanced Language Models for Question Answering

Answering complex questions about textual narratives requires reasoning over both stated context and the world knowledge that underlies it. However, pretrained language models (LM), the foundation of most modern QA systems, do not robustly represent latent relationships between concepts, which is necessary for reasoning. While knowledge graphs (KG) are often used to augment LMs with structured representations of world knowledge, it remains an open question how to effectively fuse and reason over the KG representations and the language context, which provides situational constraints and nuances. In this work, we propose GreaseLM, a new model that fuses encoded representations from pretrained LMs and graph neural networks over multiple layers of modality interaction operations. Information from both modalities propagates to the other, allowing language context representations to be grounded by structured world knowledge, and allowing linguistic nuances (e.g., negation, hedging) in the context to inform the graph representations of knowledge. Our results on three benchmarks in the commonsense reasoning (i.e., CommonsenseQA, OpenbookQA) and medical question answering (i.e., MedQA-USMLE) domains demonstrate that GreaseLM can more reliably answer questions that require reasoning over both situational constraints and structured knowledge, even outperforming models 8x larger.

preprint2022arXiv

On the Opportunities and Risks of Foundation Models

AI is undergoing a paradigm shift with the rise of models (e.g., BERT, DALL-E, GPT-3) that are trained on broad data at scale and are adaptable to a wide range of downstream tasks. We call these models foundation models to underscore their critically central yet incomplete character. This report provides a thorough account of the opportunities and risks of foundation models, ranging from their capabilities (e.g., language, vision, robotics, reasoning, human interaction) and technical principles(e.g., model architectures, training procedures, data, systems, security, evaluation, theory) to their applications (e.g., law, healthcare, education) and societal impact (e.g., inequity, misuse, economic and environmental impact, legal and ethical considerations). Though foundation models are based on standard deep learning and transfer learning, their scale results in new emergent capabilities,and their effectiveness across so many tasks incentivizes homogenization. Homogenization provides powerful leverage but demands caution, as the defects of the foundation model are inherited by all the adapted models downstream. Despite the impending widespread deployment of foundation models, we currently lack a clear understanding of how they work, when they fail, and what they are even capable of due to their emergent properties. To tackle these questions, we believe much of the critical research on foundation models will require deep interdisciplinary collaboration commensurate with their fundamentally sociotechnical nature.

preprint2022arXiv

When can I Speak? Predicting initiation points for spoken dialogue agents

Current spoken dialogue systems initiate their turns after a long period of silence (700-1000ms), which leads to little real-time feedback, sluggish responses, and an overall stilted conversational flow. Humans typically respond within 200ms and successfully predicting initiation points in advance would allow spoken dialogue agents to do the same. In this work, we predict the lead-time to initiation using prosodic features from a pre-trained speech representation model (wav2vec 1.0) operating on user audio and word features from a pre-trained language model (GPT-2) operating on incremental transcriptions. To evaluate errors, we propose two metrics w.r.t. predicted and true lead times. We train and evaluate the models on the Switchboard Corpus and find that our method outperforms features from prior work on both metrics and vastly outperforms the common approach of waiting for 700ms of silence.

preprint2020arXiv

Biomedical and Clinical English Model Packages in the Stanza Python NLP Library

We introduce biomedical and clinical English model packages for the Stanza Python NLP library. These packages offer accurate syntactic analysis and named entity recognition capabilities for biomedical and clinical text, by combining Stanza's fully neural architecture with a wide variety of open datasets as well as large-scale unsupervised biomedical and clinical text data. We show via extensive experiments that our packages achieve syntactic analysis and named entity recognition performance that is on par with or surpasses state-of-the-art results. We further show that these models do not compromise speed compared to existing toolkits when GPU acceleration is available, and are made easy to download and use with Stanza's Python interface. A demonstration of our packages is available at: http://stanza.run/bio.

preprint2020arXiv

ELECTRA: Pre-training Text Encoders as Discriminators Rather Than Generators

Masked language modeling (MLM) pre-training methods such as BERT corrupt the input by replacing some tokens with [MASK] and then train a model to reconstruct the original tokens. While they produce good results when transferred to downstream NLP tasks, they generally require large amounts of compute to be effective. As an alternative, we propose a more sample-efficient pre-training task called replaced token detection. Instead of masking the input, our approach corrupts it by replacing some tokens with plausible alternatives sampled from a small generator network. Then, instead of training a model that predicts the original identities of the corrupted tokens, we train a discriminative model that predicts whether each token in the corrupted input was replaced by a generator sample or not. Thorough experiments demonstrate this new pre-training task is more efficient than MLM because the task is defined over all input tokens rather than just the small subset that was masked out. As a result, the contextual representations learned by our approach substantially outperform the ones learned by BERT given the same model size, data, and compute. The gains are particularly strong for small models; for example, we train a model on one GPU for 4 days that outperforms GPT (trained using 30x more compute) on the GLUE natural language understanding benchmark. Our approach also works well at scale, where it performs comparably to RoBERTa and XLNet while using less than 1/4 of their compute and outperforms them when using the same amount of compute.

preprint2020arXiv

Finding Universal Grammatical Relations in Multilingual BERT

Recent work has found evidence that Multilingual BERT (mBERT), a transformer-based multilingual masked language model, is capable of zero-shot cross-lingual transfer, suggesting that some aspects of its representations are shared cross-lingually. To better understand this overlap, we extend recent work on finding syntactic trees in neural networks' internal representations to the multilingual setting. We show that subspaces of mBERT representations recover syntactic tree distances in languages other than English, and that these subspaces are approximately shared across languages. Motivated by these results, we present an unsupervised analysis method that provides evidence mBERT learns representations of syntactic dependency labels, in the form of clusters which largely agree with the Universal Dependencies taxonomy. This evidence suggests that even without explicit supervision, multilingual masked language models learn certain linguistic universals.

preprint2020arXiv

Mapping Three Decades of Intellectual Change in Academia

Research on the development of science has focused on the creation of multidisciplinary teams. However, while this coming together of people is symmetrical, the ideas, methods, and vocabulary of science have a directional flow. We present a statistical model of the text of dissertation abstracts from 1980 to 2010, revealing for the first time the large-scale flow of language across fields. Results of the analysis include identifying methodological fields that export broadly, emerging topical fields that borrow heavily and expand, and old topical fields that grow insular and retract. Particular findings show a growing split between molecular and ecological forms of biology and a sea change in the humanities and social sciences driven by the rise of gender and ethnic studies.

preprint2020arXiv

Neural Generation Meets Real People: Towards Emotionally Engaging Mixed-Initiative Conversations

We present Chirpy Cardinal, an open-domain dialogue agent, as a research platform for the 2019 Alexa Prize competition. Building an open-domain socialbot that talks to real people is challenging - such a system must meet multiple user expectations such as broad world knowledge, conversational style, and emotional connection. Our socialbot engages users on their terms - prioritizing their interests, feelings and autonomy. As a result, our socialbot provides a responsive, personalized user experience, capable of talking knowledgeably about a wide variety of topics, as well as chatting empathetically about ordinary life. Neural generation plays a key role in achieving these goals, providing the backbone for our conversational and emotional tone. At the end of the competition, Chirpy Cardinal progressed to the finals with an average rating of 3.6/5.0, a median conversation duration of 2 minutes 16 seconds, and a 90th percentile duration of over 12 minutes.

preprint2020arXiv

Optimizing the Factual Correctness of a Summary: A Study of Summarizing Radiology Reports

Neural abstractive summarization models are able to generate summaries which have high overlap with human references. However, existing models are not optimized for factual correctness, a critical metric in real-world applications. In this work, we develop a general framework where we evaluate the factual correctness of a generated summary by fact-checking it automatically against its reference using an information extraction module. We further propose a training strategy which optimizes a neural summarization model with a factual correctness reward via reinforcement learning. We apply the proposed method to the summarization of radiology reports, where factual correctness is a key requirement. On two separate datasets collected from hospitals, we show via both automatic and human evaluation that the proposed approach substantially improves the factual correctness and overall quality of outputs over a competitive neural summarization system, producing radiology summaries that approach the quality of human-authored ones.

preprint2020arXiv

Stanza: A Python Natural Language Processing Toolkit for Many Human Languages

We introduce Stanza, an open-source Python natural language processing toolkit supporting 66 human languages. Compared to existing widely used toolkits, Stanza features a language-agnostic fully neural pipeline for text analysis, including tokenization, multi-word token expansion, lemmatization, part-of-speech and morphological feature tagging, dependency parsing, and named entity recognition. We have trained Stanza on a total of 112 datasets, including the Universal Dependencies treebanks and other multilingual corpora, and show that the same neural architecture generalizes well and achieves competitive performance on all languages tested. Additionally, Stanza includes a native Python interface to the widely used Java Stanford CoreNLP software, which further extends its functionality to cover other tasks such as coreference resolution and relation extraction. Source code, documentation, and pretrained models for 66 languages are available at https://stanfordnlp.github.io/stanza.

preprint2020arXiv

Universal Dependencies v2: An Evergrowing Multilingual Treebank Collection

Universal Dependencies is an open community effort to create cross-linguistically consistent treebank annotation for many languages within a dependency-based lexicalist framework. The annotation consists in a linguistically motivated word segmentation; a morphological layer comprising lemmas, universal part-of-speech tags, and standardized morphological features; and a syntactic layer focusing on syntactic relations between predicates, arguments and modifiers. In this paper, we describe version 2 of the guidelines (UD v2), discuss the major changes from UD v1 to UD v2, and give an overview of the currently available treebanks for 90 languages.