Researcher profile

Aneta Lisowska

Aneta Lisowska contributes to research discovery and scholarly infrastructure.

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Published work

7 published item(s)

preprint2026arXiv

Multi-Objective Constraint Inference using Inverse reinforcement learning

Constraint inference is widely considered essential to align reinforcement learning agents with safety boundaries and operational guidelines by observing expert demonstrations. However, existing approaches typically assume homogeneous demonstrations (i.e., generated by a single expert or multiple experts with identical objectives). They also have limited ability to capture individual preferences and often suffer from computational inefficiencies. In this paper, we introduce Multi-Objective Constraint Inference (MOCI), a novel framework designed to jointly extract shared constraints and individual preferences from heterogeneous expert trajectories, where multiple experts pursue different objectives. MOCI effectively models and learns from diverse, and potentially conflicting, behaviors. Empirical evaluations demonstrate that MOCI significantly outperforms existing baselines, achieving improved predictive performance, and maintaining competitive computational efficiency on a standard grid-world benchmark. These results establish MOCI as an accurate, flexible, and computationally practical approach for real-world constraint inference and preference learning tasks.

preprint2022arXiv

CXR-FL: Deep Learning-Based Chest X-ray Image Analysis Using Federated Learning

Federated learning enables building a shared model from multicentre data while storing the training data locally for privacy. In this paper, we present an evaluation (called CXR-FL) of deep learning-based models for chest X-ray image analysis using the federated learning method. We examine the impact of federated learning parameters on the performance of central models. Additionally, we show that classification models perform worse if trained on a region of interest reduced to segmentation of the lung compared to the full image. However, focusing training of the classification model on the lung area may result in improved pathology interpretability during inference. We also find that federated learning helps maintain model generalizability. The pre-trained weights and code are publicly available at (https://github.com/SanoScience/CXR-FL).

preprint2022arXiv

Deep Learning Fetal Ultrasound Video Model Match Human Observers in Biometric Measurements

Objective. This work investigates the use of deep convolutional neural networks (CNN) to automatically perform measurements of fetal body parts, including head circumference, biparietal diameter, abdominal circumference and femur length, and to estimate gestational age and fetal weight using fetal ultrasound videos. Approach. We developed a novel multi-task CNN-based spatio-temporal fetal US feature extraction and standard plane detection algorithm (called FUVAI) and evaluated the method on 50 freehand fetal US video scans. We compared FUVAI fetal biometric measurements with measurements made by five experienced sonographers at two time points separated by at least two weeks. Intra- and inter-observer variabilities were estimated. Main results. We found that automated fetal biometric measurements obtained by FUVAI were comparable to the measurements performed by experienced sonographers The observed differences in measurement values were within the range of inter- and intra-observer variability. Moreover, analysis has shown that these differences were not statistically significant when comparing any individual medical expert to our model. Significance. We argue that FUVAI has the potential to assist sonographers who perform fetal biometric measurements in clinical settings by providing them with suggestions regarding the best measuring frames, along with automated measurements. Moreover, FUVAI is able perform these tasks in just a few seconds, which is a huge difference compared to the average of six minutes taken by sonographers. This is significant, given the shortage of medical experts capable of interpreting fetal ultrasound images in numerous countries.

preprint2022arXiv

What do you need to consider when designing mobile health intervention?

Designing theory-driven digital health interventions is a challenging task that needs support. We created a guide for the incomers in the field on how to design digital health interventions with case studies from the Cancer Better Life Experience (CAPABLE) European project. The guide explains how behaviour change theories can inform customisation and personalisation of the intervention. The proposed SATO (ideaS expAnded wiTh bciO) design workflow is based on the IDEAS (Integrate, Design, Assess, and Share) framework and is aligned with the Behaviour Change Intervention Ontology (BCIO). We provide a checklist of the activities that should be performed during intervention planning as well as app design templates which bundle together relevant behaviour change techniques. In the process of creating this guide, we found the necessity to extend the BCIO to support the scenarios of multiple clinical goals in the same application. The extension utilizes existing classes and properties where possible.

preprint2020arXiv

Continual Class Incremental Learning for CT Thoracic Segmentation

Deep learning organ segmentation approaches require large amounts of annotated training data, which is limited in supply due to reasons of confidentiality and the time required for expert manual annotation. Therefore, being able to train models incrementally without having access to previously used data is desirable. A common form of sequential training is fine tuning (FT). In this setting, a model learns a new task effectively, but loses performance on previously learned tasks. The Learning without Forgetting (LwF) approach addresses this issue via replaying its own prediction for past tasks during model training. In this work, we evaluate FT and LwF for class incremental learning in multi-organ segmentation using the publicly available AAPM dataset. We show that LwF can successfully retain knowledge on previous segmentations, however, its ability to learn a new class decreases with the addition of each class. To address this problem we propose an adversarial continual learning segmentation approach (ACLSeg), which disentangles feature space into task-specific and task-invariant features. This enables preservation of performance on past tasks and effective acquisition of new knowledge.

preprint2020arXiv

Paying Per-label Attention for Multi-label Extraction from Radiology Reports

Training medical image analysis models requires large amounts of expertly annotated data which is time-consuming and expensive to obtain. Images are often accompanied by free-text radiology reports which are a rich source of information. In this paper, we tackle the automated extraction of structured labels from head CT reports for imaging of suspected stroke patients, using deep learning. Firstly, we propose a set of 31 labels which correspond to radiographic findings (e.g. hyperdensity) and clinical impressions (e.g. haemorrhage) related to neurological abnormalities. Secondly, inspired by previous work, we extend existing state-of-the-art neural network models with a label-dependent attention mechanism. Using this mechanism and simple synthetic data augmentation, we are able to robustly extract many labels with a single model, classified according to the radiologist's reporting (positive, uncertain, negative). This approach can be used in further research to effectively extract many labels from medical text.

preprint2020arXiv

Teacher-Student chain for efficient semi-supervised histology image classification

Deep learning shows great potential for the domain of digital pathology. An automated digital pathology system could serve as a second reader, perform initial triage in large screening studies, or assist in reporting. However, it is expensive to exhaustively annotate large histology image databases, since medical specialists are a scarce resource. In this paper, we apply the semi-supervised teacher-student knowledge distillation technique proposed by Yalniz et al. (2019) to the task of quantifying prognostic features in colorectal cancer. We obtain accuracy improvements through extending this approach to a chain of students, where each student's predictions are used to train the next student i.e. the student becomes the teacher. Using the chain approach, and only 0.5% labelled data (the remaining 99.5% in the unlabelled pool), we match the accuracy of training on 100% labelled data. At lower percentages of labelled data, similar gains in accuracy are seen, allowing some recovery of accuracy even from a poor initial choice of labelled training set. In conclusion, this approach shows promise for reducing the annotation burden, thus increasing the affordability of automated digital pathology systems.