On symmetries in phylogenetic trees

preprint2016arXivOpen access

Abstract

Billey et al. [arXiv:1507.04976] have recently discovered a surprisingly simple formula for the number an(σ)a_n(σ) of leaf-labelled rooted non-embedded binary trees (also known as phylogenetic trees) with n≥1n\geq 1 leaves, fixed (for the relabelling action) by a given permutation σ∈Snσ\in\frak{S}_n. Denoting by λ⊢nλ\vdash n the integer partition giving the sizes of the cycles of σσ in non-increasing order, they show by a guessing/checking approach that if λλ is a binary partition (it is known that an(σ)=0a_n(σ)=0 otherwise), then an(σ)=∏i=2ℓ(λ)(2(λi+⋯+λℓ(λ))−1), a_n(σ)=\prod_{i=2}^{\ell(λ)}(2(λ_i+\cdots+λ_{\ell(λ)})-1), and they derive from it a formula and random generation procedure for tanglegrams (and more generally for tangled chains). Our main result is a combinatorial proof of the formula, which yields a simplification of the random sampler for tangled chains.

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