On representing the degree sequences of sublogarithmic-degree Wheeler graphs

preprint2022arXivOpen access

Abstract

We show how to store a searchable partial-sums data structure with constant query time for a static sequence SS of nn positive integers in o(log⁡n(log⁡log⁡n)2)o \left( \frac{\log n}{(\log \log n)^2} \right), in nHk(S)+o(n)n H_k (S) + o (n) bits for k∈o(log⁡n(log⁡log⁡n)2)k \in o \left( \frac{\log n}{(\log \log n)^2} \right). It follows that if a Wheeler graph on nn vertices has maximum degree in o(log⁡n(log⁡log⁡n)2)o \left( \frac{\log n}{(\log \log n)^2} \right), then we can store its in- and out-degree sequences $\Din$ and $\Dout$ in $n H_k (\Din) + o (n)$ and $n H_k (\Dout) + o (n)$ bits, for k∈o(log⁡n(log⁡log⁡n)2)k \in o \left( \frac{\log n}{(\log \log n)^2} \right), such that querying them for pattern matching in the graph takes constant time.

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