Dependence of DNA persistence length on ionic strength of solutions with monovalent and divalent salts: a joint theory-experiment study

preprint2015arXivOpen access

Abstract

Using high-throughput Tethered Particle Motion single molecule experiments, the double-stranded DNA persistence length, LpL_p, is measured in solutions with Na+^+ and Mg2+^{2+} ions of various ionic strengths, II. Several theoretical equations for Lp(I)L_p(I) are fitted to the experimental data, but no decisive theory is found which fits all the LpL_p values for the two ion valencies. Properly extracted from the particle trajectory using simulations, LpL_p varies from 30~nm to 55~nm, and is compared to previous experimental results. For the Na+^+ only case, LpL_p is an increasing concave function of I−1I^{-1}, well fitted by Manning's electrostatic stretching approach, but not by classical Odjik-Skolnick-Fixman theories with or without counter-ion condensation. With added Mg2+^{2+} ions, LpL_p shows a marked decrease at low II, interpreted as an ion-ion correlation effect, with an almost linear law in I−1I^{-1}, fitted by a proposed variational approach.

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