Combinatorics of k-Interval Cospeciation for Cophylogeny

preprint2014arXivOpen access

Abstract

We show that the cophylogenetic distance, k-interval cospeciation, is distinct from other metrics and accounts for global congruence between locally incongruent trees. The growth of the neighborhood of trees which satisfy the largest possible k-interval cospeciation with a given tree indicates that k-interval cospeciation is useful for analyzing simulated data.

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