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William Dawson

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Published work

10 published item(s)

preprint2026arXiv

From Knowledge to Action: Outcomes of the 2025 Large Language Model (LLM) Hackathon for Applications in Materials Science and Chemistry

Large language models (LLMs) are rapidly changing how researchers in materials science and chemistry discover, organize, and act on scientific knowledge. This paper analyzes a broad set of community-developed LLM applications in an effort to identify emerging patterns in how these systems can be used across the scientific research lifecycle. We organize the projects into two complementary categories: Knowledge Infrastructure, systems that structure, retrieve, synthesize, and validate scientific information; and Action Systems, systems that execute, coordinate, or automate scientific work across computational and experimental environments. The submissions reveal a shift from single-purpose LLM tools toward integrated, multi-agent workflows that combine retrieval, reasoning, tool use, and domain-specific validation. Prominent themes include retrieval-augmented generation as grounding infrastructure, persistent structured knowledge representations, multimodal and multilingual scientific inputs, and early progress toward laboratory-integrated closed-loop systems. Together, these results suggest that LLMs are evolving from general-purpose assistants into composable infrastructure for scientific reasoning and action. This work provides a community snapshot of that transition and a practical taxonomy for understanding emerging LLM-enabled workflows in materials science and chemistry.

preprint2020arXiv

Complexity Reduction in Density Functional Theory Calculations of Large Systems: System Partitioning and Fragment Embedding

With the development of low order scaling methods for performing Kohn-Sham Density Functional Theory, it is now possible to perform fully quantum mechanical calculations of systems containing tens of thousands of atoms. However, with an increase in the size of system treated comes an increase in complexity, making it challenging to analyze such large systems and determine the cause of emergent properties. To address this issue, in this paper we present a systematic complexity reduction methodology which can break down large systems into their constituent fragments, and quantify inter-fragment interactions. The methodology proposed here requires no a priori information or user interaction, allowing a single workflow to be automatically applied to any system of interest. We apply this approach to a variety of different systems, and show how it allows for the derivation of new system descriptors, the design of QM/MM partitioning schemes, and the novel application of graph metrics to molecules and materials.

preprint2020arXiv

ELSI -- An Open Infrastructure for Electronic Structure Solvers

Routine applications of electronic structure theory to molecules and periodic systems need to compute the electron density from given Hamiltonian and, in case of non-orthogonal basis sets, overlap matrices. System sizes can range from few to thousands or, in some examples, millions of atoms. Different discretization schemes (basis sets) and different system geometries (finite non-periodic vs. infinite periodic boundary conditions) yield matrices with different structures. The ELectronic Structure Infrastructure (ELSI) project provides an open-source software interface to facilitate the implementation and optimal use of high-performance solver libraries covering cubic scaling eigensolvers, linear scaling density-matrix-based algorithms, and other reduced scaling methods in between. In this paper, we present recent improvements and developments inside ELSI, mainly covering (1) new solvers connected to the interface, (2) matrix layout and communication adapted for parallel calculations of periodic and/or spin-polarized systems, (3) routines for density matrix extrapolation in geometry optimization and molecular dynamics calculations, and (4) general utilities such as parallel matrix I/O and JSON output. The ELSI interface has been integrated into four electronic structure code projects (DFTB+, DGDFT, FHI-aims, SIESTA), allowing us to rigorously benchmark the performance of the solvers on an equal footing. Based on results of a systematic set of large-scale benchmarks performed with Kohn-Sham density-functional theory and density-functional tight-binding theory, we identify factors that strongly affect the efficiency of the solvers, and propose a decision layer that assists with the solver selection process. Finally, we describe a reverse communication interface encoding matrix-free iterative solver strategies that are amenable, e.g., for use with planewave basis sets.

preprint2019arXiv

Chandra Observations of the Spectacular A3411-12 Merger Event

We present deep Chandra observations of A3411-12, a remarkable merging cluster that hosts the most compelling evidence for electron re-acceleration at cluster shocks to date. Using the $Y_X-M$ scaling relation, we find $r_{500} \sim 1.3$ Mpc, $M_{500} = (7.1 \pm 0.7) \times 10^{14} \ M_{\rm{\odot}}$, $kT=6.5\pm 0.1$ keV, and a gas mass of $M_{\rm g,500} = (9.7 \pm 0.1) \times 10^{13} M_\odot$. The gas mass fraction within $r_{500}$ is $f_{\rm g} = 0.14 \pm 0.01$. We compute the shock strength using density jumps to conclude that the Mach number of the merging subcluster is small ($M \leq 1.15_{-0.09}^{+0.14}$). We also present pseudo-density, projected temperature, pseudo-pressure, and pseudo-entropy maps. Based on the pseudo-entropy map we conclude that the cluster is undergoing a mild merger, consistent with the small Mach number. On the other hand, radio relics extend over Mpc scale in the A3411-12 system, which strongly suggests that a population of energetic electrons already existed over extended regions of the cluster.

preprint2018arXiv

The Reionization Lensing Cluster Survey (RELICS) and the Brightest High-z Galaxies

Massive foreground galaxy clusters magnify and distort the light of objects behind them, permitting a view into both the extremely distant and intrinsically faint galaxy populations. We present here the z ~ 6 - 8 candidate high-redshift galaxies from the Reionization Lensing Cluster Survey (RELICS), a Hubble and Spitzer Space Telescope survey of 41 massive galaxy clusters spanning an area of ~200 arcmin^2. These clusters were selected to be excellent lenses and we find similar high-redshift sample sizes and magnitude distributions as CLASH. We discover 321 candidate galaxies with photometric redshifts between z ~ 6 to z ~ 8, including extremely bright objects with H-band magnitudes of m_AB ~ 23 mag. As a sample, the observed (lensed) magnitudes of these galaxies are among the brightest known at z> 6, comparable to much wider, blank-field surveys. RELICS demonstrates the efficiency of using strong gravitational lenses to produce high-redshift samples in the epoch of reionization. These brightly observed galaxies are excellent targets for follow-up study with current and future observatories, including the James Webb Space Telescope.

preprint2015arXiv

Neutral hydrogen gas, past and future star-formation in galaxies in and around the 'Sausage' merging galaxy cluster

CIZA J2242.8+5301 ($z = 0.188$, nicknamed 'Sausage') is an extremely massive ($M_{200}\sim 2.0 \times 10^{15}M_\odot$ ), merging cluster with shock waves towards its outskirts, which was found to host numerous emission-line galaxies. We performed extremely deep Westerbork Synthesis Radio Telescope HI observations of the 'Sausage' cluster to investigate the effect of the merger and the shocks on the gas reservoirs fuelling present and future star formation (SF) in cluster members. By using spectral stacking, we find that the emission-line galaxies in the 'Sausage' cluster have, on average, as much HI gas as field galaxies (when accounting for the fact cluster galaxies are more massive than the field galaxies), contrary to previous studies. Since the cluster galaxies are more massive than the field spirals, they may have been able to retain their gas during the cluster merger. The large HI reservoirs are expected to be consumed within $\sim0.75-1.0$ Gyr by the vigorous SF and AGN activity and/or driven out by the out-flows we observe. We find that the star-formation rate in a large fraction of H$α$ emission-line cluster galaxies correlates well with the radio broad band emission, tracing supernova remnant emission. This suggests that the cluster galaxies, all located in post-shock regions, may have been undergoing sustained SFR for at least 100 Myr. This fully supports the interpretation proposed by Stroe et al. (2015) and Sobral et al. (2015) that gas-rich cluster galaxies have been triggered to form stars by the passage of the shock.

preprint2014arXiv

MC^2: Constraining the Dark Matter Distribution of the Violent Merging Galaxy Cluster CIZA J2242.8+5301 by Piercing through the Milky Way

CIZA J2242.8+5301 is a merging system with a prominent (~2 Mpc long) radio relic, which together with the morphology of the X-ray emission provides strong evidence for a violent collision along the N-S axis. We present our constraints on the dark matter distribution of this unusual system using Subaru and CFHT imaging data. Measuring a high S/N lensing signal from this cluster is potentially a challenging task because of its proximity to the Milky Way plane (|b|~5 deg). We overcome this challenge with careful observation planning and systematics control, which enables us to successfully map the dark matter distribution of the cluster with high fidelity. The resulting mass map shows that the mass distribution is highly elongated along the N-S merger axis inferred from the orientation of the radio relics. Based on our mass reconstruction, we identify two sub-clusters, which coincide with the cluster galaxy distributions. We determine their masses using MCMC analysis by simultaneously fitting two NFW halos without fixing their centroids. The resulting masses of the northern and southern systems are $M_{200}=11.0_{-3.2}^{+3.7}\times10^{14} M_{\sun}$ and $9.8_{-2.5}^{+3.8}\times10^{14} M_{\sun}$, respectively, indicating that we are witnessing a post-collision of two giant systems of nearly equal mass. When the mass and galaxy centroids are compared in detail, we detect ~ 1' (~190 kpc) offsets in both northern and southern sub-clusters. We find that the galaxy luminosity-mass offset for the northern clump is statistically significant at the ~2 sigma level whereas the detection is only marginal for the southern sub-cluster in part because of a relatively large mass centroid error. We conclude that it is yet premature to uniquely attribute the galaxy-mass misalignment to SIDM and discuss caveats.

preprint2014arXiv

Optical Galaxy Clusters in the Deep Lens Survey

We present the first sample of 882 optically selected galaxy clusters in the Deep Lens Survey (DLS), selected with the Bayesian Cluster Finder. We create mock DLS data to assess completeness and purity rates, and find that both are at least $70\%$ within 0.1$\le z \le$ 1.2 for clusters with $M_{200}\ge 1.2\times 10^{14}M_{\odot}$. We verified the integrity of the sample by performing several comparisons with other optical, weak lensing, X-ray and spectroscopic surveys which overlap the DLS footprint: the estimated redshifts are consistent with the spectroscopic redshifts of known clusters (for $z>0.25$ where saturation in the DLS is not an issue); our richness estimates in combination with a previously calibrated richness-mass relation yields individual cluster mass estimates consistent with available SHeLS dynamical mass estimates; synthetic mass maps made from the optical mass estimates are correlated ($>3σ$ significance) with the weak lensing mass maps; and the mass function thus derived is consistent with theoretical predictions for the CDM scenario. With the verified sample we investigated correlations between the brightest cluster galaxies (BCG) properties and the host cluster properties within a broader range in redshift (0.25 $\le z \le$ 0.8) and mass ($\ge2.4\times 10^{14}M_{\odot}$) than in previous work. We find that the slope of the BCG magnitude-redshift relation throughout this redshift range is consistent with that found at lower redshifts. This result supports an extrapolation to higher redshift of passive evolution of the BCG within the hierarchical scenario.

preprint2014arXiv

The rise and fall of star-formation in $\bf z\sim0.2$ merging galaxy clusters

CIZA J2242.8+5301 (`Sausage') and 1RXS J0603.3+4213 (`Toothbrush') are two low-redshift ($z\sim0.2$), massive ($\sim2\times10^{15}M_\odot$), post-core passage merging clusters, which host shock waves traced by diffuse radio emission. To study their star-formation properties, we uniformly survey the `Sausage' and `Toothbrush' clusters in broad and narrow band filters and select a sample of $201$ and $463$ line emitters, down to a rest-frame equivalent width ($13$Å). We robustly separate between H$α$ and higher redshift emitters using a combination of optical multi-band (B, g, V, r, i, z) and spectroscopic data. We build H$α$ luminosity functions for the entire cluster region, near the shock fronts, and away from the shock fronts and find striking differences between the two clusters. In the dynamically younger, $1$ Gyr old `Sausage' cluster we find numerous ($59$) H$α$ emitters above a star-formation rate (SFR) of $0.17$ M$_{\sun}$ yr$^{-1}$ surprisingly located in close proximity to the shock fronts, embedded in very hot intra-cluster medium plasma. The SFR density for the cluster population is at least at the level of typical galaxies at $z\sim2$. Down to the same star-formation rate, the possibly dynamically more evolved `Toothbrush' cluster has only $9$ H$α$ galaxies. The cluster H$α$ galaxies fall on the SFR-stellar mass relation $z\sim0.2$ for the field. However, the `Sausage' cluster has an H$α$ emitter density $>20$ times that of blank fields. If the shock passes through gas-rich cluster galaxies, the compressed gas could collapse into dense clouds and excite star-formation for a few $100$ Myr. This process ultimately leads to a rapid consumption of the molecular gas, accelerating the transformation of gas-rich field spirals into cluster S0s or ellipticals.

preprint2013arXiv

Shedding Light on the Matter of Abell 781

The galaxy cluster Abell 781 West has been viewed as a challenge to weak gravitational lensing mass calibration, as Cook and dell'Antonio (2012) found that the weak lensing signal-to-noise in three independent sets of observations was consistently lower than expected from mass models based on X-ray and dynamical measurements. We correct some errors in statistical inference in Cook and dell'Antonio (2012) and show that their own results agree well with the dynamical mass and exhibit at most 2.2--2.9$σ$ low compared to the X-ray mass, similar to the tension between the dynamical and X-ray masses. Replacing their simple magnitude cut with weights based on source photometric redshifts eliminates the tension between lensing and X-ray masses; in this case the weak lensing mass estimate is actually higher than, but still in agreement with, the dynamical estimate. A comparison of lensing analyses with and without photometric redshifts shows that a 1--2$σ$ chance alignment of low-redshift sources lowers the signal-to-noise observed by all previous studies which used magnitude cuts rather than photometric redshifts. The fluctuation is unexceptional, but appeared to be highly significant in Cook and dell'Antonio (2012) due to the errors in statistical interpretation.