Researcher profile

Theodoros N. Arvanitis

Theodoros N. Arvanitis contributes to research discovery and scholarly infrastructure.

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Published work

2 published item(s)

preprint2026arXiv

Hi-GaTA: Hierarchical Gated Temporal Aggregation Adapter for Surgical Video Report Generation

Automated, clinician-grade assessment reports for surgical procedures could reduce documentation burden and provide objective feedback, yet remain challenging due to the difficulty of aligning dense spatio-temporal video representations with language-based reasoning and the scarcity of high-quality, privacy-preserving datasets. To address this gap, we establish a benchmark comprising 214 high-quality simulated surgical videos paired with surgeon-authored evaluation reports. Building on this resource, we propose a Perception-Alignment-Reasoning framework for surgical video report generation, featuring Hi-GaTA, a novel lightweight temporal adapter that efficiently compresses long video sequences into compact, LLM-compatible visual prefix tokens through short-to-long-range temporal aggregation. For robust visual perception, we pretrain Sur40k, a surgical-specific ViViT-style video encoder on 40,000 minutes of public surgical videos to capture fine-grained spatio-temporal procedural priors. Hi-GaTA employs a temporal pyramid with text-conditioned dual cross-attention, and improves multi-scale consistency through cross-level gated fusion and an increasing-depth strategy. Finally, we fine-tune the LLM backbone using LoRA to enable coherent and stylistically consistent surgical report generation under limited supervision. Experiments show our approach achieves the best overall performance, with consistent gains over strong Multimodal Large Language Model (MLLM) baselines. Ablation studies further validate the effectiveness of each proposed component.

preprint2020arXiv

Combining multi-site Magnetic Resonance Imaging with machine learning predicts survival in paediatric brain tumours

Background Brain tumours represent the highest cause of mortality in the paediatric oncological population. Diagnosis is commonly performed with magnetic resonance imaging and spectroscopy. Survival biomarkers are challenging to identify due to the relatively low numbers of individual tumour types, especially for rare tumour types such as atypical rhabdoid tumours. Methods 69 children with biopsy-confirmed brain tumours were recruited into this study. All participants had both perfusion and diffusion weighted imaging performed at diagnosis. Data were processed using conventional methods, and a Bayesian survival analysis performed. Unsupervised and supervised machine learning were performed with the survival features, to determine novel sub-groups related to survival. Sub-group analysis was undertaken to understand differences in imaging features, which pertain to survival. Findings Survival analysis showed that a combination of diffusion and perfusion imaging were able to determine two novel sub-groups of brain tumours with different survival characteristics (p <0.01), which were subsequently classified with high accuracy (98%) by a neural network. Further analysis of high-grade tumours showed a marked difference in survival (p=0.029) between the two clusters with high risk and low risk imaging features. Interpretation This study has developed a novel model of survival for paediatric brain tumours, with an implementation ready for integration into clinical practice. Results show that tumour perfusion plays a key role in determining survival in brain tumours and should be considered as a high priority for future imaging protocols.