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Benjamin Sorkin

Benjamin Sorkin contributes to research discovery and scholarly infrastructure.

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Published work

3 published item(s)

preprint2026arXiv

Consistent thermodynamics reconstructed from transitions between nonequilibrium steady-states

Constructing a thermodynamic framework for nonequilibrium systems remains a major challenge, as quantities such as temperature and free energy often become ambiguous when inferred solely from steady-state properties. Here we take a transformation-based approach and experimentally examine transitions between nonequilibrium steady states (NESS). Using an optically trapped microparticle driven by a tunable correlated stochastic force, we generate active-like steady states with controllable noise statistics. By abruptly changing the trap stiffness, we measure the stochastic work, heat, and entropy produced during NESS-to-NESS transformations. We identify a state-dependent effective temperature that restores the second law for these transitions, enabling the definition of a generalized work that incorporates the consequence of the nonequilibrium fluctuations. With this quantity, we derive and experimentally verify a Crooks-like fluctuation relation linking work distributions to a nonequilibrium free-energy difference defined through the effective temperature. Finally, we establish a fluctuation-response relation for the positional variance following stiffness changes. We demonstrate that this relation is key to distinguishing systems that can be described by a unique effective temperature (i.e., those under equilibrium or white-noise conditions) from those under colored-noise, where an equilibrium-like response cannot be restored. These results delineate the applicability and limits of effective-temperature thermodynamics in driven systems.

preprint2026arXiv

Propelling catalytic structures using active phase separation

Living systems routinely consume energy to achieve motility, often using intricate biomolecular machinery. In this work, we show that active droplets can sustain indefinite self-propulsion of a spherical colloid in an otherwise homogeneous, isotropic, and autonomous environment. Our proposed minimal mechanism consists of phase-separating proteins, enzymes passivating them, and complementary enzymes anchored to the colloid surface that reactivate the proteins. This passivation-activation cycle gives rise to a symmetry breaking - nucleation and stabilization of a condensate near the colloid surface, which in turn exerts a repulsive force on the colloid. We numerically demonstrate that this mechanism can propel micron-sized colloids at speeds of up to a hundred microns per second. This propulsion mode is strongly resistant to Brownian fluctuations and external forces, suggesting that propulsion mechanisms based on biomolecular condensates may offer a complementary, motor-free route to biological transport.

preprint2025arXiv

Accelerated Ostwald ripening by chemical activity

Phase separation of biomolecular condensates promotes membrane-free compartmentalization in cells. The dynamics of these biocondensates is routinely regulated by energy-consuming processes. Here, we devise a theory pinpointing how active chemical reactions, interconverting molecules between phase-separating and inert forms, can drive faster condensate coarsening. We find that mass conservation limits droplet volume growth to being linear in time regardless of activity, resembling the passive Lifshitz-Slyozov law. However, if reactions are restricted to occur only outside droplets, the rate of Ostwald ripening can be increased by an arbitrarily large factor. Our theory is quantitatively supported by recent experiments on ripening in the presence of fueled interconversion reactions, under precisely the predicted conditions. We posit that the ability to induce rapid biocondensate coarsening can be advantageous in synthetic-biological contexts, e.g., as a regulator of metabolic channeling.